Parental gene:

ENSOCUG00000021027

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:4:5182518..5206032(-)


>ENSOCUG00000021027
ATGGCGGAGGTGGAGGAGACACTGAAGAGACTTCAGAGCCAGAAGGGGGTGCAGGGGATCATTGTGGTGAACACAGAAGG
TATCCCCATCAAGAGCACCATGGACAACCCCACAACCACACAGTACGCCAACCTCATGCACAACTTCATCTTGAAGGCGC
GGAGCACGGTGCGTGAAATTGACCCCCAGAATGACCTGACCTTCCTTCGAATTCGCTCCAAGAAAAATGAAATTATGGTT
GCACCAGATAAAGACTATTTCCTGATTGTAATTCAGAACCCAACTGAATAA

Library Parental gene expression (RPM)
SRP017611_brain 55 .85 RPM
SRP017611_kidney 27 .97 RPM
SRP017611_liver 10 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009179 possible_ortholog 1 retrogene
retro_amel_1111,
Canis familiaris ENSCAFG00000007547 possible_ortholog 6 retrogenes
retro_cfam_1161, retro_cfam_1294, retro_cfam_1577, retro_cfam_1601, retro_cfam_1782, retro_cfam_930,
Callithrix jacchus ENSCJAG00000018199 ortholog_one2many 10 retrogenes
retro_cjac_1010, retro_cjac_1172, retro_cjac_1274, retro_cjac_1539, retro_cjac_2071, retro_cjac_2902, retro_cjac_3185, retro_cjac_3215, retro_cjac_3260, retro_cjac_882,
Equus caballus ENSECAG00000008404 possible_ortholog 2 retrogenes
retro_ecab_102, retro_ecab_553,
Echinops telfairi ENSETEG00000018637 ortholog_one2many 2 retrogenes
retro_etel_218, retro_etel_699,
Felis catus ENSFCAG00000002304 possible_ortholog 1 retrogene
retro_fcat_1228,
Homo sapiens ENSG00000125971 ortholog_one2many 2 retrogenes
retro_hsap_1946, retro_hsap_948,
Gorilla gorilla ENSGGOG00000023900 ortholog_one2many 1 retrogene
retro_ggor_764,
Loxodonta africana ENSLAFG00000029820 possible_ortholog 2 retrogenes
retro_lafr_722, retro_lafr_852,
Microcebus murinus ENSMICG00000003253 possible_ortholog 1 retrogene
retro_mmur_263,
Myotis lucifugus ENSMLUG00000004820 possible_ortholog 3 retrogenes
retro_mluc_1200, retro_mluc_1763, retro_mluc_443,
Macaca mulatta ENSMMUG00000031253 ortholog_one2many 1 retrogene
retro_mmul_779,
Nomascus leucogenys ENSNLEG00000010082 ortholog_one2many 2 retrogenes
retro_nleu_1478, retro_nleu_2456,
Otolemur garnettii ENSOGAG00000016802 possible_ortholog 2 retrogenes
retro_ogar_7, retro_ogar_983,
Ochotona princeps ENSOPRG00000004714 ortholog_one2many 1 retrogene
retro_opri_888,
Pongo abelii ENSPPYG00000010937 ortholog_one2many 1 retrogene
retro_pabe_810,
Pan troglodytes ENSPTRG00000013416 ortholog_one2many 1 retrogene
retro_ptro_655,
Rattus norvegicus ENSRNOG00000025715 ortholog_one2many 1 retrogene
retro_rnor_1883,
Ictidomys tridecemlineatus ENSSTOG00000014820 possible_ortholog 1 retrogene
retro_itri_1244,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_351 98.96 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ocun_745 59.79 98.96
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000021027 retrocopies