RetrogeneDB ID: | retro_etel_218 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3741:53732..53982(+) | ||
Located in intron of: | ENSETEG00000006367 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DYNLRB1 | ||
Ensembl ID: | ENSETEG00000018637 | ||
Aliases: | None | ||
Description: | dynein, light chain, roadblock-type 1 [Source:HGNC Symbol;Acc:15468] |
Percent Identity: | 62.07 % |
Parental protein coverage: | 72.17 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | PGSSVWVRPC-VPCIPFSL--PQPAEVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDN-PTTTQYANLM |
PGS...V..C.V...PFSL..P..AE.EETL...Q.QKGVQGI.V.NTEG.P.KST.D...TT.QY.N.M | |
Retrocopy | PGSLRCVSSC*VLSVPFSLS*PSEAEAEETLE--QPQKGVQGITVANTEGSPVKSTTDS>TTT-QYTNCM |
Parental | HSFILKARSTVREIDPQ |
H.FI.K.RSTVRE.DPQ | |
Retrocopy | HTFISKGRSTVRETDPQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |