Parental gene:

RPL10, ENSECAG00000017154

Aliases:None
Description:ribosomal protein L10 [Source:HGNC Symbol;Acc:10298]
Organism:Horse (Equus caballus)
Coordinates:X:122695957..122698636(+)


>ENSECAG00000017154
ATGGGCCGCCGCCCCGCCCGATGTTACCGGTATTGTAAGAACAAGCCATACCCAAAGTCTCGCTTCTGCCGAGGTGTCCC
TGACGCCAAGATTCGCATTTTCGATCTGGGGCGGAAGAAGGCAAAAGTTGATGAGTTCCCACTTTGTGGCCACATGGTGT
CTGATGAATATGAGCAGCTCTCCTCAGAAGCCCTGGAGGCTGCTCGTATTTGTGCCAACAAGTACATGGTGAAAAGCTGT
GGCAAAGATGGCTTTCACATCCGAGTGCGGCTCCATCCCTTCCATGTCATCCGCATCAACAAGATGTTGTCCTGTGCTGG
GGCTGACAGGCTCCAAACCGGTATGCGGGGTGCCTTTGGAAAGCCCCAAGGCACAGTGGCTAGGGTCCACATTGGCCAAG
TCATCATGTCTATCCGCACCAAGCTGCAGAACAAGGAGCATGTGATTGAAGCCCTACGCAGGGCCAAGTTCAAGTTCCCT
GGCCGCCAGAAGATTCACATCTCGAAGAAGTGGGGCTTTACTAAGTTTAATGCAGATGAATTTGAAGACATGGTGGCTGA
AAAGCGGCTCATCCCAGATGGCTGTGGAGTTAAATACATCCCTAATCGTGGCCCCCTGGACAAATGGCGAGCCCTGCACT
CATGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 1252 .86 RPM
SRP021940_embryo 1043 .21 RPM
SRP021940_cerebellum 470 .04 RPM
SRP021940_testis 264 .98 RPM
SRP021940_placental_villous 768 .00 RPM
SRP021940_articular_cartilage 1464 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007454 possible_ortholog 2 retrogenes
retro_btau_140, retro_btau_99,
Cavia porcellus ENSCPOG00000002355 ortholog_one2one 1 retrogene
retro_cpor_64,
Macropus eugenii ENSMEUG00000013163 possible_ortholog 3 retrogenes
retro_meug_1839, retro_meug_5, retro_meug_547,
Microcebus murinus ENSMICG00000004658 ortholog_one2one 2 retrogenes
retro_mmur_1077, retro_mmur_4,
Monodelphis domestica ENSMODG00000008731 possible_ortholog 2 retrogenes
retro_mdom_177, retro_mdom_829,
Mustela putorius furo ENSMPUG00000009320 ortholog_one2one 3 retrogenes
retro_mputfur_1405, retro_mputfur_54, retro_mputfur_84,
Mus musculus ENSMUSG00000008682 possible_ortholog 1 retrogene
retro_mmus_71,
Otolemur garnettii ENSOGAG00000000099 ortholog_one2one 3 retrogenes
retro_ogar_293, retro_ogar_2995, retro_ogar_3284,
Ictidomys tridecemlineatus ENSSTOG00000011857 ortholog_one2one 2 retrogenes
retro_itri_174, retro_itri_506,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_113 90.65 100.00
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Download FASTA sequences of all ENSECAG00000017154 retrocopies