Parental gene:

RPL10, ENSBTAG00000007454

Aliases:RPL10, QM
Description:60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XSI3]
Organism:Cow (Bos taurus)
Coordinates:X:40364801..40367164(+)


>ENSBTAG00000007454
ATGGGCCGCCGCCCCGCCCGGTGTTACCGGTATTGTAAGAACAAGCCGTACCCAAAGTCTCGCTTCTGTCGAGGTGTCCC
TGATGCTAAGATTCGCATCTTTGACTTGGGGCGTAAGAAGGCCAAAGTGGATGAGTTCCCACTCTGTGGCCACATGGTGT
CAGATGAGTATGAGCAGCTCTCCTCTGAAGCCCTGGAGGCTGCCCGTATTTGTGCCAACAAGTACATGGTGAAAAGCTGT
GGCAAAGATGGTTTTCACATCCGAGTGCGGCTCCACCCCTTCCATGTCATCCGCATCAACAAGATGTTGTCTTGTGCTGG
AGCTGATAGACTCCAGACAGGTATGCGCGGTGCCTTTGGAAAGCCCCAGGGCACAGTGGCCAGGGTCCACATTGGCCAGG
TCATAATGTCCATCCGCACCAAGCTGCAGAACAAGGAACATGTGATTGAAGCCCTCCGCCGGGCCAAGTTCAAGTTCCCT
GGCCGCCAGAAGATCCACATCTCTAAGAAGTGGGGATTTACCAAGTTCAACGCGGATGAATTTGAGAACATGGTGGCAGA
AAAGCGACTCATCCCAGACGGCTGTGGGGTCAAATACATCCCTAATCGTGGTCCCCTGGACAAATGGCGGGCCCTACACT
CATGA

Library Parental gene expression (RPM)
SRP017611_brain 123 .06 RPM
SRP017611_kidney 446 .49 RPM
SRP017611_liver 359 .27 RPM
ERP005899_muscle 1811 .83 RPM
ERP005899_liver 289 .03 RPM
SRP030211_testis 36 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000002355 possible_ortholog 1 retrogene
retro_cpor_64,
Equus caballus ENSECAG00000017154 possible_ortholog 1 retrogene
retro_ecab_113,
Homo sapiens ENSG00000147403 ortholog_one2many 3 retrogenes
retro_hsap_2030, retro_hsap_3265, retro_hsap_3437,
Macropus eugenii ENSMEUG00000013163 possible_ortholog 3 retrogenes
retro_meug_1839, retro_meug_5, retro_meug_547,
Microcebus murinus ENSMICG00000004658 possible_ortholog 2 retrogenes
retro_mmur_1077, retro_mmur_4,
Myotis lucifugus ENSMLUG00000014337 ortholog_one2many 3 retrogenes
retro_mluc_1592, retro_mluc_191, retro_mluc_275,
Monodelphis domestica ENSMODG00000008731 possible_ortholog 2 retrogenes
retro_mdom_177, retro_mdom_829,
Mustela putorius furo ENSMPUG00000009320 possible_ortholog 3 retrogenes
retro_mputfur_1405, retro_mputfur_54, retro_mputfur_84,
Mus musculus ENSMUSG00000008682 ortholog_many2many 1 retrogene
retro_mmus_71,
Otolemur garnettii ENSOGAG00000000099 possible_ortholog 3 retrogenes
retro_ogar_293, retro_ogar_2995, retro_ogar_3284,
Pongo abelii ENSPPYG00000020874 ortholog_one2many 5 retrogenes
retro_pabe_173, retro_pabe_1854, retro_pabe_2036, retro_pabe_2843, retro_pabe_2955,
Ictidomys tridecemlineatus ENSSTOG00000011857 possible_ortholog 2 retrogenes
retro_itri_174, retro_itri_506,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_99 98.13 100.00
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2. retro_btau_140 99.53 100.00
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Download FASTA sequences of all ENSBTAG00000007454 retrocopies