Parental gene:

EIF3F, ENSEEUG00000001226

Aliases:None
Description:eukaryotic translation initiation factor 3, subunit F [Source:HGNC Symbol;Acc:3275]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_7313:186..2736(+)


>ENSEEUG00000001226
TACGCTACTGGCCACGACATCACAGAGCACTCTGTGCTGATCCACGAGTACTACAGCCGGGAAGCCCCCAACCCCATTCA
CCTCACCGTGGATACAAGCCTTCAGAATGGCCGCATGAGCATCAAAGCCTATGTCAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGACCTGATT
ATGAAGACTTGTTTCAGCTCCAACCGAGTGATTGGCCTCTCGAGTGACTTACAGCAAGTAGGAGGTGCATCAGCTCGAAT
CCAGGATGCCCTCAGCACAGTGTTGCAGTATGCCGAGGACGTGCTGTCTGGAAAGGTGTCAGCCGACAATACCGTGGGCC
GGTTCTTGATGAGTCTGGTTAACCAAGTCCCCAAAATTGTTCCTGATGACTTTGAGACCATGCTCAACAGCAACATTAAT
GACCTGTTGATGGTGACGTACCTGGCCAATCTCACACAGTCCCAGATTGCCCTCAATGAAAAACTTGTAAACCTGTGA

Library Parental gene expression (RPM)
SRP017611_liver 64 .95 RPM
SRP017611_kidney 102 .21 RPM
SRP017611_brain 57 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004861 ortholog_one2one 1 retrogene
retro_btau_527,
Callithrix jacchus ENSCJAG00000011903 possible_ortholog 1 retrogene
retro_cjac_1416,
Echinops telfairi ENSETEG00000002717 ortholog_one2one 2 retrogenes
retro_etel_1583, retro_etel_35,
Gorilla gorilla ENSGGOG00000011702 possible_ortholog 5 retrogenes
retro_ggor_1566, retro_ggor_1567, retro_ggor_1568, retro_ggor_1589, retro_ggor_1590,
Myotis lucifugus ENSMLUG00000000825 possible_ortholog 1 retrogene
retro_mluc_2356,
Otolemur garnettii ENSOGAG00000003220 possible_ortholog 3 retrogenes
retro_ogar_3041, retro_ogar_859, retro_ogar_863,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_130 75.45 58.38
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Download FASTA sequences of all ENSEEUG00000001226 retrocopies