Parental gene:

EIF3F, ENSBTAG00000004861

Aliases:None
Description:None
Organism:Cow (Bos taurus)
Coordinates:15:45130567..45138822(-)


>ENSBTAG00000004861
TCCAACTCGCTCCCTTCCGCTCCTCGCTCCTTCTCTCTCGACAAGATGGCCACACCGGCAGTACCGGCGAGCGCGCCTCC
CGCCACCCCATCCGAAGCCCCAGCTGCGGCCTCATCTCCGGCCTCGGCCCCGGTCCCGGCCCCAGCCCCAGCCTCAGCCT
CGGCCCCGGCTCCATCGCCGGCTCCGGCTGCAGCTCCATCGCCGGCTCCCGCGTCATCCTCAGACCCGGCAGCAGCAGCG
GCTACGACCGCGGCTCCGGGCCAGACCCCGGCCTCAGCGCCAGCCCCAGCGCAGACCCCCGCACAGTCTCTGTCAGGCCC
TGCTCTCCCAGGCCCCTTCCCCGGCGGCCGCGTGGTCCGGCTGCACCCGGTCATTTTGGCCTCCATCGTGGACAGCTACG
AGCGACGCAACGAGGGAGCTGCCCGAGTTATCGGGACCCTGCTGGGAACCGTTGACAAGCACTCAGTGGAAGTCACCAAT
TGCTTTTCAGTGCCACACAATGAGTCAGAAGATGAGGTGGCTGTTGACATGGAGTTTGCTAAGAACATGTATGAGTTGCA
CAAGAAAGTCTCTCCAAACGAGCTCATCCTGGGCTGGTACGCTACAGGCCATGACATCACGGAGCACTCAGTGCTGATCC
ATGAGTACTATAGCCGAGAAGCCCCCAATCCCATTCACCTCACGGTGGACACCAGCCTCCAGAACGGCCGCATGAGCATC
AAGGCCTACGTCAGCACTTTAATGGGTGTTCCTGGGAGGACCATGGGGGTGATGTTCACCCCTCTGACAGTGAAATACAC
ATATTACGACACTGAACGCATTGGAGTTGACCTGATCATGAAGACCTGTTTTAGCCCCAACCGGGTGATCGGCCTCTCCA
GTGACTTGCAGCAAGTGGGCGGGGCTTCCGCGCGCATCCAGGACGCCCTCAGCACAGTGCTGCAGTATGCGGAGGACGTG
CTGTCTGGAAAGGTGTCAGCCGACAATACCGTGGGCCGCTTCTTGATGAGTCTGGTTAACCAAGTACCCAAAATAGTTCC
CGAGGACTTCGAGACCATGCTCAACAGCAACATCAACGACCTGTTGATGGTGACCTATCTGGCCAACCTCACACAGTCAC
AAATTGCCCTCAATGAGAAGCTTGTGAACCTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 61 .94 RPM
SRP017611_kidney 72 .67 RPM
SRP017611_liver 53 .91 RPM
ERP005899_muscle 209 .20 RPM
ERP005899_liver 23 .14 RPM
SRP030211_testis 34 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006884 ortholog_one2one 1 retrogene
retro_cfam_1339,
Callithrix jacchus ENSCJAG00000011903 ortholog_one2many 1 retrogene
retro_cjac_1416,
Erinaceus europaeus ENSEEUG00000001226 ortholog_one2one 1 retrogene
retro_eeur_130,
Echinops telfairi ENSETEG00000002717 ortholog_one2many 2 retrogenes
retro_etel_1583, retro_etel_35,
Homo sapiens ENSG00000175390 ortholog_one2one 3 retrogenes
retro_hsap_2106, retro_hsap_2512, retro_hsap_4321,
Gorilla gorilla ENSGGOG00000011702 ortholog_one2many 5 retrogenes
retro_ggor_1566, retro_ggor_1567, retro_ggor_1568, retro_ggor_1589, retro_ggor_1590,
Myotis lucifugus ENSMLUG00000000825 ortholog_one2many 1 retrogene
retro_mluc_2356,
Macaca mulatta ENSMMUG00000015010 ortholog_one2one 1 retrogene
retro_mmul_412,
Oryctolagus cuniculus ENSOCUG00000004225 ortholog_one2one 1 retrogene
retro_ocun_1488,
Otolemur garnettii ENSOGAG00000003220 ortholog_one2many 3 retrogenes
retro_ogar_3041, retro_ogar_859, retro_ogar_863,
Pongo abelii ENSPPYG00000003512 ortholog_one2many 1 retrogene
retro_pabe_175,
Pan troglodytes ENSPTRG00000003326 ortholog_one2one 1 retrogene
retro_ptro_197,
Pteropus vampyrus ENSPVAG00000015764 ortholog_one2one 1 retrogene
retro_pvam_371,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_527 93.97 82.03
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Download FASTA sequences of all ENSBTAG00000004861 retrocopies