Parental gene: | MRPL15, ENSEEUG00000001454 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L15 [Source:HGNC Symbol;Acc:14054] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_4133:645..9624(+) |
>ENSEEUG00000001454
ATGGCGGCTCCCGTGCGGGGCGGCGGGTCTCGGGCCCTGGACCTGCTCCGGGGTCTGCCTCGTGTGAGCCTGGCCAACTT
AAAGCCGAATCCAGGGTCCAGGAAACAGGAAAGACGTCCAAGAGGTAAAAGGAGAGGTAGGAAATGTGGCAGAGGCCATA
AAGGAAACCGACAGAAAGGAACCCGTCCCCGACTGGGCTTTGAGGGAAGCCAAACTCCGTACCTCCTATTCCCAAAATAT
GGTTTTAATGAAGGACATAGCTTCCGACGCCAGTATCACCCTTTGAGTCTCCATAGACTGCAGTATCTTATTGATTTGGG
TCGAGTTGATCCTACTCAGCCTATTGACTTAACCCAGCTTGTCAATGGGCGAGGTGTGACCATCCAGCCTCTTAAAAGGG
ACTATGGTGTCCATCTAGTAGAGGAGGGTGCTGATACGTTTAAGGCGAAAGTTAATATCGAAGTACAGTTGGCTTCAGAG
GTAGCCATTGCTGCAATTGAGAAAAACGGTGGTGTTGTCACTACAGCCTTCTATGATCCGAGAAGTCTGGACATTTTATG
CAAACCTATTCCATTCTTTCTGCGTGGACAACCCATTCCCAAACGAATGCTTCCTCCAGAAGAACTGGTCCCGTATTACA
CTGATGCAAAGAATCGTGGCTACCTGGCTGATCCTGGCAAATATCCTGAAGCAAGACTTGAACTTGCCAAGAAATATGGT
TATATTTTACCTGATATCACAAAAGATGAACTCTTCAAAATGCTTAGTACTCGGAAGGACCCAAGACAGATTTTCTTTGG
TCTCGCTCCTGGATGGGTGGTGAACATGGCAGATAGGAAAATCCTAAAACCTACAGATGAGAATCTCCTCAAGTATTATA
GCTCATGA
ATGGCGGCTCCCGTGCGGGGCGGCGGGTCTCGGGCCCTGGACCTGCTCCGGGGTCTGCCTCGTGTGAGCCTGGCCAACTT
AAAGCCGAATCCAGGGTCCAGGAAACAGGAAAGACGTCCAAGAGGTAAAAGGAGAGGTAGGAAATGTGGCAGAGGCCATA
AAGGAAACCGACAGAAAGGAACCCGTCCCCGACTGGGCTTTGAGGGAAGCCAAACTCCGTACCTCCTATTCCCAAAATAT
GGTTTTAATGAAGGACATAGCTTCCGACGCCAGTATCACCCTTTGAGTCTCCATAGACTGCAGTATCTTATTGATTTGGG
TCGAGTTGATCCTACTCAGCCTATTGACTTAACCCAGCTTGTCAATGGGCGAGGTGTGACCATCCAGCCTCTTAAAAGGG
ACTATGGTGTCCATCTAGTAGAGGAGGGTGCTGATACGTTTAAGGCGAAAGTTAATATCGAAGTACAGTTGGCTTCAGAG
GTAGCCATTGCTGCAATTGAGAAAAACGGTGGTGTTGTCACTACAGCCTTCTATGATCCGAGAAGTCTGGACATTTTATG
CAAACCTATTCCATTCTTTCTGCGTGGACAACCCATTCCCAAACGAATGCTTCCTCCAGAAGAACTGGTCCCGTATTACA
CTGATGCAAAGAATCGTGGCTACCTGGCTGATCCTGGCAAATATCCTGAAGCAAGACTTGAACTTGCCAAGAAATATGGT
TATATTTTACCTGATATCACAAAAGATGAACTCTTCAAAATGCTTAGTACTCGGAAGGACCCAAGACAGATTTTCTTTGG
TCTCGCTCCTGGATGGGTGGTGAACATGGCAGATAGGAAAATCCTAAAACCTACAGATGAGAATCTCCTCAAGTATTATA
GCTCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 36 .17 RPM |
| SRP017611_kidney | 54 .20 RPM |
| SRP017611_brain | 26 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001174 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000006988 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005299 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016719 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000017664 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001724 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010533 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000033845 | ortholog_one2one | 2 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000007286 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003768 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000000921 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008566 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000030578 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014106 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011844 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_128 | 87.54 | 94.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_707 | 75.00 | 59.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000001454 retrocopies