Parental gene: | CAPZA2, ENSEEUG00000009063 |
| Aliases: | None |
| Description: | capping protein (actin filament) muscle Z-line, alpha 2 [Source:HGNC Symbol;Acc:1490] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_8587:8499..42125(+) |
>ENSEEUG00000009063
ATGGCGGATCTAGAGGAGCAGTTGTCTGATGAGGAGAAGGTGCGTATAGCAGCAAAATTTATCATTCATGCACCTCCTGG
AGAATTTAATGAAGTGTTTAATGATGTTCGGTTACTTCTTAATAACGATAATCTTCTCAGGGAAGGAGCAGCCCAGGCAT
TGGCACAATATAACTTGGACACCCCTGTTAAAATTGAAGCCTATGAAGATCAGGTGTTGATTACAGAACATGGCGACTTG
GGAAACGGGAAGTTTTTGGATCCGAAAAACAGAATCTGTTTCAAATTTGATCACTTAAGGAAGGAAGCAACTGATCCAAG
ACCATATGAAGCAGAAAATGCAGTTGAGTCATGGAGAACTTCAGTTGAAACTGCCCTGAGAGCTTATGTAAAGGAACATT
ATCCAAATGGAGTCTGCACTGTATATGGTAAAAAAATAGATGGACAGCAAACCATTATCGCATGCATAGAAAGCCATCAG
TTCCAAGCAAAAAACTTTTGGAATGGTCGTTGGAGATCAGAGTGGAAGTTTACTATCTCTCCTTCATCTACCCAAGTGGT
TGGCATCTTGAAAATTCAGGTTCATTATTATGAAGATGGTAATGTTCAACTAGTGAGTCATAAAGATATACAAGATTCCC
TAACAGTGTCTAATGAGGCACAAACAGCAAAAGAATTTATAAAGATTGTAGAAGCTGCGGAAAATGAATATCAGACTGCC
ATCAGTGAGAATTATCAAACAATGTCGGACACTACTTTCAAAGCCTTACGTCGACAGTTGCCAGTTACACGTACTAAGAT
CGATTGGAACAAGATCCTTAGCTACAAGATTGGCAAAGAGATGCAGAATGCATAA
ATGGCGGATCTAGAGGAGCAGTTGTCTGATGAGGAGAAGGTGCGTATAGCAGCAAAATTTATCATTCATGCACCTCCTGG
AGAATTTAATGAAGTGTTTAATGATGTTCGGTTACTTCTTAATAACGATAATCTTCTCAGGGAAGGAGCAGCCCAGGCAT
TGGCACAATATAACTTGGACACCCCTGTTAAAATTGAAGCCTATGAAGATCAGGTGTTGATTACAGAACATGGCGACTTG
GGAAACGGGAAGTTTTTGGATCCGAAAAACAGAATCTGTTTCAAATTTGATCACTTAAGGAAGGAAGCAACTGATCCAAG
ACCATATGAAGCAGAAAATGCAGTTGAGTCATGGAGAACTTCAGTTGAAACTGCCCTGAGAGCTTATGTAAAGGAACATT
ATCCAAATGGAGTCTGCACTGTATATGGTAAAAAAATAGATGGACAGCAAACCATTATCGCATGCATAGAAAGCCATCAG
TTCCAAGCAAAAAACTTTTGGAATGGTCGTTGGAGATCAGAGTGGAAGTTTACTATCTCTCCTTCATCTACCCAAGTGGT
TGGCATCTTGAAAATTCAGGTTCATTATTATGAAGATGGTAATGTTCAACTAGTGAGTCATAAAGATATACAAGATTCCC
TAACAGTGTCTAATGAGGCACAAACAGCAAAAGAATTTATAAAGATTGTAGAAGCTGCGGAAAATGAATATCAGACTGCC
ATCAGTGAGAATTATCAAACAATGTCGGACACTACTTTCAAAGCCTTACGTCGACAGTTGCCAGTTACACGTACTAAGAT
CGATTGGAACAAGATCCTTAGCTACAAGATTGGCAAAGAGATGCAGAATGCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 43 .73 RPM |
| SRP017611_kidney | 92 .27 RPM |
| SRP017611_brain | 101 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004925 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000007677 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000005771 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000016226 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019711 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012158 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000000707 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007910 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003591 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000017933 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000026942 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000024828 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012657 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_142 | 83.92 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_167 | 75.52 | 66.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_351 | 79.62 | 90.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_eeur_365 | 73.96 | 66.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_eeur_482 | 77.78 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000009063 retrocopies