Parental gene:

CAPZA2, ENSGGOG00000012158

Aliases:None
Description:F-actin-capping protein subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q2IBE7]
Organism:Gorilla (Gorilla gorilla)
Coordinates:7:114753890..114810721(+)


>ENSGGOG00000012158
ATGGCGGATCTGGAGGAGCAGTTGTCTGATGAAGAGAAGGTGCGTATAGCAGCAAAATTCATCATTCATGCCCCTCCTGG
AGAATTTAATGAGGTTTTTAATGATGTTCGGTTACTGCTTAATAATGACAATCTTCTCAGGGAAGGAGCAGCCCATGCAT
TTGCACAGTATAACTTGGACCAGTTTACTCCAGTAAAAATTGAAGGTTATGAAGATCAGGTATTGATAACAGAACATGGC
GACTTGGGAAATGGAAAGTTTTTGGATCCAAAGAACAGAATCTGTTTTAAATTTGATCACTTAAGGAAGGAGGCAACTGA
TCCAAGACCCTGTGAAGTAGAAAATGCAGTTGAATCATGGAGAACTTCAGTAGAAACTGCTCTGAGAGCTTACGTAAAAG
AACATTACCCGAATGGAGTCTGCACTGTGTATGGCAAAAAAATAGATGGACAGCAAACCATTATTGCATGCATAGAAAGC
CATCAGTTCCAAGCAAAAAACTTTTGGAATGGTCGTTGGAGGTCAGAATGGAAGTTTACAATCACTCCTTCAACCACTCA
AGTGGTTGGCATCTTGAAAATTCAGGTTCATTATTATGAAGATGGTAATGTTCAGCTAGTGAGTCATAAAGATATACAAG
ATTCCCTAACAGTGTCTAATGAAGTGCAAACAGCAAAAGAATTTATAAAGATTGTAGAAGCTGCAGAAAATGAATACCAG
ACTGCCATCAGTGAGAATTATCAGACAATGTCAGACACTACTTTCAAAGCCTTACGTCGACAGTTGCCAGTTACGCGCAC
TAAGATTGATTGGAACAAGATCCTTAGCTACAAGATTGGCAAAGAGATGCAGAATGCATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 47 .19 RPM
SRP007412_cerebellum 28 .33 RPM
SRP007412_heart 16 .07 RPM
SRP007412_kidney 96 .95 RPM
SRP007412_liver 41 .33 RPM
SRP007412_testis 40 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004925 ortholog_one2one 2 retrogenes
retro_chof_2296, retro_chof_680,
Cavia porcellus ENSCPOG00000007677 ortholog_one2one 1 retrogene
retro_cpor_205,
Dasypus novemcinctus ENSDNOG00000005771 ortholog_one2one 1 retrogene
retro_dnov_1892,
Dipodomys ordii ENSDORG00000016226 ortholog_one2one 1 retrogene
retro_dord_266,
Erinaceus europaeus ENSEEUG00000009063 ortholog_one2one 5 retrogenes
retro_eeur_142, retro_eeur_167, retro_eeur_351, retro_eeur_365, retro_eeur_482,
Echinops telfairi ENSETEG00000019711 ortholog_one2one 3 retrogenes
retro_etel_1516, retro_etel_2020, retro_etel_442,
Gorilla gorilla ENSGGOG00000023677 within_species_paralog 1 retrogene
retro_ggor_1216,
Microcebus murinus ENSMICG00000000707 ortholog_one2one 1 retrogene
retro_mmur_1224,
Myotis lucifugus ENSMLUG00000007910 ortholog_one2one 1 retrogene
retro_mluc_2595,
Oryctolagus cuniculus ENSOCUG00000003591 ortholog_one2one 2 retrogenes
retro_ocun_1531, retro_ocun_873,
Pongo abelii ENSPPYG00000017933 ortholog_one2one 1 retrogene
retro_pabe_1321,
Sus scrofa ENSSSCG00000026942 ortholog_one2many 2 retrogenes
retro_sscr_1127, retro_sscr_600,
Ictidomys tridecemlineatus ENSSTOG00000024828 ortholog_one2one 1 retrogene
retro_itri_1561,
Tupaia belangeri ENSTBEG00000012657 ortholog_one2one 2 retrogenes
retro_tbel_2004, retro_tbel_2228,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1774 74.05 100.00
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Download FASTA sequences of all ENSGGOG00000012158 retrocopies