Parental gene: | KATNBL1, ENSETEG00000001640 |
| Aliases: | None |
| Description: | katanin p80 subunit B-like 1 [Source:HGNC Symbol;Acc:26199] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_3671:56710..125478(-) |
>ENSETEG00000001640
ATGGCATCTGAAACCCACAACGTTAAAAAACGGAACCTTTGTAATAATACTGAGGATCATTCCAAGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAAGAAATCTCCAAAACAGTTGGCTGCTTACATAAATA
GAACAGTTGGACTAGCTGTGAAGAGCCCAGATAAACTACGTAAGGCGATCTATTTCAGAAAGAAAGTTCATCGTCCTCTC
CCCAGTCCTTGTTACAGAAAGAAGCAGGCCCCTAGAAGTGGGGGCTGTGTCATGGCAAATAAAGAAAATGAACTGGCTTG
TGCAGGCCACCTACCTGACAAATTACGCCATGATAGTCGAACATATTTGATTAACTCCAGTGATTCTGGGGCTTCACAGA
CAGAAGGCCCATCATCAAAATATAGTGGCTTTTTTTCTGAGGTTTCTCAGGACCATGAAACAATGGCGCAAGTTTTGTTC
AGCAGAAACTTGAGGTTGAATGTAGCTTTAACCTTCTGGAGAAAGAGAAGTATAAGTGAACTTGTAGCCTATTTGGTGAG
GATAGAAGATCTTGGGGTTGTGGTGGACTGCCTTCCTGTGCTCACCAATAGTTTGCAGGAAGAAAAACAATACATCTCAC
TTGGCTGCTGTGTAGACTTGTTACCTCTAGTAAAGTCACTACTTAAGAGCAAATTTGAAGAGTATGTAATAGTTGGTTTA
AACTGGCTTCAAGCAGTTATAAAAAGATGGTGGTCAGAATTATCATCCAAAACAGAAATTAAAAATGATGGAAATATTCA
GATTTTAAAACAACAGTTAAGTGGGTTATGGGAACAGGAAAACCATCTGACTTTGGTTCCAGGATATACTGGTAATATAG
CTAAGAATGTAGATGCTTATTTATTACAACATTGA
ATGGCATCTGAAACCCACAACGTTAAAAAACGGAACCTTTGTAATAATACTGAGGATCATTCCAAGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAAGAAATCTCCAAAACAGTTGGCTGCTTACATAAATA
GAACAGTTGGACTAGCTGTGAAGAGCCCAGATAAACTACGTAAGGCGATCTATTTCAGAAAGAAAGTTCATCGTCCTCTC
CCCAGTCCTTGTTACAGAAAGAAGCAGGCCCCTAGAAGTGGGGGCTGTGTCATGGCAAATAAAGAAAATGAACTGGCTTG
TGCAGGCCACCTACCTGACAAATTACGCCATGATAGTCGAACATATTTGATTAACTCCAGTGATTCTGGGGCTTCACAGA
CAGAAGGCCCATCATCAAAATATAGTGGCTTTTTTTCTGAGGTTTCTCAGGACCATGAAACAATGGCGCAAGTTTTGTTC
AGCAGAAACTTGAGGTTGAATGTAGCTTTAACCTTCTGGAGAAAGAGAAGTATAAGTGAACTTGTAGCCTATTTGGTGAG
GATAGAAGATCTTGGGGTTGTGGTGGACTGCCTTCCTGTGCTCACCAATAGTTTGCAGGAAGAAAAACAATACATCTCAC
TTGGCTGCTGTGTAGACTTGTTACCTCTAGTAAAGTCACTACTTAAGAGCAAATTTGAAGAGTATGTAATAGTTGGTTTA
AACTGGCTTCAAGCAGTTATAAAAAGATGGTGGTCAGAATTATCATCCAAAACAGAAATTAAAAATGATGGAAATATTCA
GATTTTAAAACAACAGTTAAGTGGGTTATGGGAACAGGAAAACCATCTGACTTTGGTTCCAGGATATACTGGTAATATAG
CTAAGAATGTAGATGCTTATTTATTACAACATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000006413 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000021110 | ortholog_one2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000011153 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000016279 | ortholog_one2one | 5 retrogenes | |
| Dipodomys ordii | ENSDORG00000013172 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000023450 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000134152 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000014230 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000015610 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001532 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000000013 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008019 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010772 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017654 | ortholog_one2one | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015633 | ortholog_one2one | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000010379 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006309 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000006877 | ortholog_one2one | 3 retrogenes | |
| Sorex araneus | ENSSARG00000007891 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003813 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001614 | ortholog_one2one | 7 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011059 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000007170 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_319 | 65.82 | 51.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_518 | 99.24 | 86.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_etel_635 | 89.80 | 80.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_etel_1169 | 88.61 | 51.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_etel_1341 | 89.47 | 62.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_etel_2032 | 83.46 | 86.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_etel_2062 | 98.48 | 86.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000001640 retrocopies