Parental gene:

PNO1, ENSFCAG00000025330

Aliases:None
Description:partner of NOB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:32790]
Organism:Cat (Felis catus)
Coordinates:A3:87759254..87774228(+)


>ENSFCAG00000025330
ATGGAAACGGAGATGGAGGCCCAGAGCGCGGGGGCTGAGGACGGCTTCACCCAAGTCACCCGCAAGGGTGGCCGGCGGGC
GAAGAAACGGCAGGCTGAGCAGCTGTCCGCGGCGGGGGAGGGCGGGGACGCGGCCCGCATGGACACAGAGGAGGCCCGGC
CCGCGAAGAGACCCGTTTTCCCGCCCCTCGCTGGGGATGGATTCCTGAGTGGGAAAGAAGAAACAAGGAAAATTCCGGTC
CCAGCTAACAGATACACGCCATTAAAAGAAAACTGGATGAAGATATTTACTCCTGTTGTAGAACATTTGGGACTTCAGAT
ACGCTTTAACTTGAAATCGAGGAATGTAGAGATCAGGACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAG
CTGATTTTGTGAAAGCCTTTATTCTTGGGTTTCAGGTAGAGGATGCAGTTGCCCTCATTAGGTTGGATGACCTCTTCCTA
GAGTCCTTTGAAATTACAGATGTGAAGCCCCTAAAGGGAGACCACCTGTCAAGAGCAATAGGAAGAATCGCTGGCAAAGG
AGGAAAAACCAAATTCACCATAGAGAATGTGACACGGACGCGGATAGTTTTGGCTGATGTGAAAGTTCACATCCTTGGCT
CTTTCCAGAACATCAAGATGGCAAGAACTGCCATATGCAACCTTATCCTGGGAAATCCTCCATCAAAGGTTTATGGCAAT
ATCCGAGCCGTGGCTAGCAGAGCAGCAGATCGGTTCTGA

Library Parental gene expression (RPM)
SRP017611_liver 5 .05 RPM
SRP017611_kidney 12 .26 RPM
SRP017611_brain 10 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003256 ortholog_one2one 1 retrogene
retro_cfam_1886,
Callithrix jacchus ENSCJAG00000006564 ortholog_one2many 3 retrogenes
retro_cjac_2615, retro_cjac_273, retro_cjac_4127,
Loxodonta africana ENSLAFG00000000046 ortholog_one2one 1 retrogene
retro_lafr_419,
Microcebus murinus ENSMICG00000010897 ortholog_one2one 1 retrogene
retro_mmur_516,
Myotis lucifugus ENSMLUG00000010850 ortholog_one2one 1 retrogene
retro_mluc_1719,
Macaca mulatta ENSMMUG00000017461 ortholog_one2many 2 retrogenes
retro_mmul_102, retro_mmul_352,
Nomascus leucogenys ENSNLEG00000009993 ortholog_one2one 1 retrogene
retro_nleu_2389,
Oryctolagus cuniculus ENSOCUG00000006100 ortholog_one2many 1 retrogene
retro_ocun_47,
Otolemur garnettii ENSOGAG00000016637 ortholog_one2one 1 retrogene
retro_ogar_3025,
Pongo abelii ENSPPYG00000012353 ortholog_one2one 1 retrogene
retro_pabe_1232,
Rattus norvegicus ENSRNOG00000005524 ortholog_one2one 1 retrogene
retro_rnor_712,
Sus scrofa ENSSSCG00000008352 ortholog_one2one 2 retrogenes
retro_sscr_114, retro_sscr_352,
Tarsius syrichta ENSTSYG00000004007 ortholog_one2one 1 retrogene
retro_tsyr_1625,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_864 83.52 68.65
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2. retro_fcat_1521 71.61 91.27
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Download FASTA sequences of all ENSFCAG00000025330 retrocopies