Parental gene:

ENSOCUG00000006100

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:117959190..117972280(-)


>ENSOCUG00000006100
ATGGAAGGCGAGATGGAGACACAGGGTGCTGGGTCCGAGGACGGCTTCACTCAAGTCACTCGCAAGGGTGGCCGGCGGGC
GAAGAAACGGCAGGCTGAGCAGCTGTCCGCATCCGGGGAGGGCGGGGATGCGGGCCGCATGGACACCGAGGAGGCCCGGC
CGGCCAAGAGGCCCGTCTTCCCGCCCCTGTCCGGGGACGGACTCCTGGGTGGGAAAGAAGAAACGAGGAAGATTCCAGTC
CCAGCCAACAGGTACACCCCGCTGAAGGAAAACTGGATGAAGATATTCACTCCTATTGTAGAACACTTGGGCCTTCAGAT
TCGCTTTAACTTGAAATCAAGGAATGTGGAGATCAGGACTTGTAAAGAAACCAAGGATGTCAGTGCTCTGACCAAAGCTG
CTGATTTTGTGAAAGCCTTTCTTCTTGGCTTTCAGGTGGAGGATGCACTGGCTCTCATCAGATTGGATGACCTCTTCCTA
GAGTCTTTTGAAATAACTGATGTTAAGCCCCTAAAGGGAGACCACCTGTCTAGGGCAATCGGAAGAATTGCCGGCAAAGG
AGGAAAAACCAAATTCACCATAGAGAATGTGACACGGACACGGATAGTTTTGGCTGATGTGAAAGTTCACATCCTTGGCT
CTTTCCAAAACATCAAGATGGCGAGAACTGCCATTTGTAACCTCATCCTGGGAAATCCTCCCTCAAAGGTTTACGGCAAC
ATTCGAGCTGTGGCTAGCAGAGCAGCAGATCGATTCTGA

Library Parental gene expression (RPM)
SRP017611_liver 1 .62 RPM
SRP017611_kidney 4 .76 RPM
SRP017611_brain 3 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003256 ortholog_one2many 1 retrogene
retro_cfam_1886,
Callithrix jacchus ENSCJAG00000006564 ortholog_many2many 3 retrogenes
retro_cjac_2615, retro_cjac_273, retro_cjac_4127,
Felis catus ENSFCAG00000025330 ortholog_one2many 2 retrogenes
retro_fcat_1521, retro_fcat_864,
Loxodonta africana ENSLAFG00000000046 ortholog_one2many 1 retrogene
retro_lafr_419,
Microcebus murinus ENSMICG00000010897 ortholog_one2many 1 retrogene
retro_mmur_516,
Myotis lucifugus ENSMLUG00000010850 ortholog_one2many 1 retrogene
retro_mluc_1719,
Macaca mulatta ENSMMUG00000017461 ortholog_many2many 2 retrogenes
retro_mmul_102, retro_mmul_352,
Nomascus leucogenys ENSNLEG00000009993 ortholog_one2many 1 retrogene
retro_nleu_2389,
Otolemur garnettii ENSOGAG00000016637 ortholog_one2many 1 retrogene
retro_ogar_3025,
Pongo abelii ENSPPYG00000012353 ortholog_one2many 1 retrogene
retro_pabe_1232,
Rattus norvegicus ENSRNOG00000005524 ortholog_one2many 1 retrogene
retro_rnor_712,
Sus scrofa ENSSSCG00000008352 ortholog_one2many 2 retrogenes
retro_sscr_114, retro_sscr_352,
Tarsius syrichta ENSTSYG00000004007 ortholog_one2many 1 retrogene
retro_tsyr_1625,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_47 100.00 100.00
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Download FASTA sequences of all ENSOCUG00000006100 retrocopies