Parental gene: | FHL1, ENSG00000022267 |
| Aliases: | FHL1, FHL-1, FHL1A, FHL1B, FLH1A, KYOT, SLIM, SLIM-1, SLIM1, SLIMMER, XMPMA |
| Description: | four and a half LIM domains 1 [Source:HGNC Symbol;Acc:3702] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | X:135229558..135293518(+) |
>ENSG00000022267
ATGGCGGAGAAGTTTGACTGCCACTACTGCAGGGATCCCTTGCAGGGGAAGAAGTATGTGCAAAAGGATGGCCACCACTG
CTGCCTGAAATGCTTTGACAAGTTCTGTGCCAACACCTGTGTGGAATGCCGCAAGCCCATCGGTGCGGACTCCAAGGAGG
TGCACTATAAGAACCGCTTCTGGCATGACACCTGCTTCCGCTGTGCCAAGTGCCTTCACCCCTTGGCCAATGAGACCTTT
GTGGCCAAGGACAACAAGATCCTGTGCAACAAGTGCACCACTCGGGAGGACTCCCCCAAGTGCAAGGGGTGCTTCAAGGC
CATTGTGGCAGGAGATCAAAACGTGGAGTACAAGGGGACCGTCTGGCACAAAGACTGCTTCACCTGTAGTAACTGCAAGC
AAGTCATCGGGACTGGAAGCTTCTTCCCTAAAGGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAAGTTTGCCAAG
CATTGCGTGAAGTGCAACAAGGCCATCACATCTGGAGGAATCACTTACCAGGATCAGCCCTGGCATGCCGATTGCTTTGT
GTGTGTTACCTGCTCTAAGAAGCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTATTACTGCGTGGATTGCTACA
AGAACTTTGTGGCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGGAAAAGGACTGTGTCAAGAGTGAGCCACCCA
GTCTCTAAAGCTAGGAAGCCCCCAGTGTGCCACGGGAAACGCTTGCCTCTCACCCTGTTTCCCAGCGCCAACCTCCGGGG
CAGGCATCCGGGTGGAGAGAGGACTTGTCCCTCGTGGGTGGTGGTTCTTTATAGAAAAAATCGAAGCTTAGCAGCTCCTC
GAGGCCCGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTGCTTCCACTGCAAAA
AATGCTCCGTGA
ATGGCGGAGAAGTTTGACTGCCACTACTGCAGGGATCCCTTGCAGGGGAAGAAGTATGTGCAAAAGGATGGCCACCACTG
CTGCCTGAAATGCTTTGACAAGTTCTGTGCCAACACCTGTGTGGAATGCCGCAAGCCCATCGGTGCGGACTCCAAGGAGG
TGCACTATAAGAACCGCTTCTGGCATGACACCTGCTTCCGCTGTGCCAAGTGCCTTCACCCCTTGGCCAATGAGACCTTT
GTGGCCAAGGACAACAAGATCCTGTGCAACAAGTGCACCACTCGGGAGGACTCCCCCAAGTGCAAGGGGTGCTTCAAGGC
CATTGTGGCAGGAGATCAAAACGTGGAGTACAAGGGGACCGTCTGGCACAAAGACTGCTTCACCTGTAGTAACTGCAAGC
AAGTCATCGGGACTGGAAGCTTCTTCCCTAAAGGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAAGTTTGCCAAG
CATTGCGTGAAGTGCAACAAGGCCATCACATCTGGAGGAATCACTTACCAGGATCAGCCCTGGCATGCCGATTGCTTTGT
GTGTGTTACCTGCTCTAAGAAGCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTATTACTGCGTGGATTGCTACA
AGAACTTTGTGGCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGGAAAAGGACTGTGTCAAGAGTGAGCCACCCA
GTCTCTAAAGCTAGGAAGCCCCCAGTGTGCCACGGGAAACGCTTGCCTCTCACCCTGTTTCCCAGCGCCAACCTCCGGGG
CAGGCATCCGGGTGGAGAGAGGACTTGTCCCTCGTGGGTGGTGGTTCTTTATAGAAAAAATCGAAGCTTAGCAGCTCCTC
GAGGCCCGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTGCTTCCACTGCAAAA
AATGCTCCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 18 .61 RPM |
| bodymap2_lung | 682 .79 RPM |
| bodymap2_breast | 1687 .12 RPM |
| bodymap2_adipose | 992 .98 RPM |
| bodymap2_adrenal | 234 .99 RPM |
| bodymap2_skeletal_muscle | 4525 .77 RPM |
| bodymap2_thyroid | 1431 .25 RPM |
| bodymap2_prostate | 782 .44 RPM |
| bodymap2_colon | 686 .67 RPM |
| bodymap2_testis | 399 .86 RPM |
| bodymap2_brain | 122 .22 RPM |
| bodymap2_heart | 708 .74 RPM |
| bodymap2_white_blood_cells | 26 .87 RPM |
| bodymap2_lymph_node | 201 .63 RPM |
| bodymap2_ovary | 93 .38 RPM |
| bodymap2_kidney | 66 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000015644 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000196923 | other_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010054 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000009342 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000014336 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000007922 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023092 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020761 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2878 | 85.00 | 93.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000022267 retrocopies