RetrogeneDB ID: | retro_mluc_311 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430083:511466..512333(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000007197 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000014336 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.12 % |
Parental protein coverage: | 97.3 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PSRYKVGTMAEKFDCHYCRDPLQGKKYVEKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYWH |
PSR.K.G.MAE.F.CHYC...L.GKKYVEK..HHCCL.C.D..CANTCVEC...IGAD.KEV.YK...WH | |
Retrocopy | PSRSKLGSMAEQFNCHYCKASLHGKKYVEKEDHHCCLDCYDEHCANTCVECHQTIGADAKEVRYKEGFWH |
Parental | DTCFRCAKCLHPLANETFMSKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKGTVWHKDCFTCSNC |
DTCFRC..C.HPLA.E.F..K.NK.LC..C...E...KCKGC..PI..GDQNVEYKGTVWH..CF.CSNC | |
Retrocopy | DTCFRCSQCQHPLATESFVAKENKVLCKQCHLLESTYKCKGCSQPIMPGDQNVEYKGTVWHQNCFVCSNC |
Parental | KQVIGSGSFFPKGEDFYCVTCHESKFAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTA |
KQVIG..SFFPKGE..YC..C.E.KFAKHC.KC.KAITSGGITYQDQPWHA.CFVCVTCSKKLAGQRFTA | |
Retrocopy | KQVIGTSSFFPKGEEYYCMACYEEKFAKHCMKCKKAITSGGITYQDQPWHADCFVCVTCSKKLAGQRFTA |
Parental | VEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEHVY |
VEDQYYCVDCYKN.VAKKCAGCKNPITGFGKGSSVV.YEGQSWHDYCFHCKKCS.NLA.KRFVFHQE.VY | |
Retrocopy | VEDQYYCVDCYKNYVAKKCAGCKNPITGFGKGSSVVTYEGQSWHDYCFHCKKCSLNLASKRFVFHQEQVY |
Parental | CPDCAKKL |
CPDCAKKL | |
Retrocopy | CPDCAKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000015644 | 2 retrocopies | |
Homo sapiens | ENSG00000022267 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000010054 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000009342 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014336 | 2 retrocopies |
retro_mluc_311 , retro_mluc_814,
|
Macaca mulatta | ENSMMUG00000007922 | 1 retrocopy | |
Mus musculus | ENSMUSG00000023092 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002560 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000020761 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000000875 | 1 retrocopy |