RetrogeneDB ID: | retro_mluc_814 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429777:10060860..10061722(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000014336 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.38 % |
Parental protein coverage: | 97.64 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | GPSRYKVGTMAEKFDCHYCRDPLQGKKYVEKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYW |
GPSRYKVG.MAEK.DCH.CRDPL.GKKYVEKDGHH.CLKCFDKFCANTCVE..KPIGAD..EVHYKNR.W | |
Retrocopy | GPSRYKVGPMAEKCDCHCCRDPLRGKKYVEKDGHHRCLKCFDKFCANTCVEGPKPIGADPEEVHYKNRCW |
Parental | HDTCFRCAKCLHPLANETFMSKDNKILCNKCTTREDSP-KCKGCFKPIVAGDQNVEYKGTVWHKDCFTC- |
HDTC.RCAKC.HPLANETFM.KDNKILCNKCTTREDSP.KCKG.FKPIVAGD.NVE.KGTVWHKDCFT.. | |
Retrocopy | HDTCVRCAKCQHPLANETFMPKDNKILCNKCTTREDSP<KCKGRFKPIVAGDGNVEHKGTVWHKDCFTA< |
Parental | SNCKQVIGSGSFFPKGEDFYCVTCHESKFAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQR |
SNCKQVIGSGSFFPKGEDF.C..CHESK.AK.CVKCNKAI.SGGITYQDQPWHAECFVCVTCSKKL.GQR | |
Retrocopy | SNCKQVIGSGSFFPKGEDF-CMICHESKLAKLCVKCNKAIPSGGITYQDQPWHAECFVCVTCSKKLSGQR |
Parental | FTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQE |
FTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVV.YEGQSWHDYCFHCKKCSVNLANK.FVFHQE | |
Retrocopy | FTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVTYEGQSWHDYCFHCKKCSVNLANKCFVFHQE |
Parental | HVYCPDCAKKL |
HVYCPDCAKKL | |
Retrocopy | HVYCPDCAKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000015644 | 2 retrocopies | |
Homo sapiens | ENSG00000022267 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000010054 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000009342 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014336 | 2 retrocopies |
retro_mluc_311, retro_mluc_814 ,
|
Macaca mulatta | ENSMMUG00000007922 | 1 retrocopy | |
Mus musculus | ENSMUSG00000023092 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002560 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000020761 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000000875 | 1 retrocopy |