Parental gene: | Fhl1, ENSMUSG00000023092 |
| Aliases: | Fhl1, FHL-1, KyoT, RAM14-1, SLIM, SLIM-1 |
| Description: | four and a half LIM domains 1 [Source:MGI Symbol;Acc:MGI:1298387] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | X:56731786..56793346(+) |
>ENSMUSG00000023092
ATGTCGGAGAAGTTCGACTGTCACTACTGCAGGGACCCCTTGCAGGGGAAGAAGTACGTGCAGAAGGATGGCCGTCACTG
CTGCCTGAAGTGCTTTGACAAGTTCTGCGCCAACACCTGCGTGGACTGCCGCAAGCCCATAAGCGCTGATGCCAAGGAGG
TGCATTATAAGAATCGCTACTGGCACGACAACTGCTTCCGCTGTGCCAAGTGCCTTCACCCCTTGGCCAGTGAGACCTTT
GTGTCCAAGGATGGCAAGATCCTGTGCAACAAGTGCGCTACTCGGGAGGACTCCCCCAGGTGCAAAGGGTGCTTCAAGGC
CATTGTGGCAGGAGACCAGAACGTGGAGTACAAGGGCACCGTCTGGCATAAAGACTGCTTCACCTGCAGCAACTGCAAGC
AAGTCATTGGGACCGGAAGCTTCTTCCCGAAAGGGGAGGACTTCTACTGTGTGACTTGCCATGAGACCAAGTTCGCCAAA
CATTGCGTGAAGTGCAACAAGGCCATCACATCTGGAGGAATCACTTACCAGGATCAGCCCTGGCATGCCGAGTGCTTTGT
GTGTGTTACCTGCTCTAAGAAGCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTATTACTGCGTGGATTGCTACA
AGAACTTTGTGGCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGGAAAAGGACTGTGTCAAGAGTGAGCCACCCA
GTCTCTAAAGCTAGGAAGTCCCCAGTGTGCCACGGGAAACGCTTGCCTCTCACCCTGTTTCCCAGCGCCAACCTCCGGGG
CAGGCATCCGGGTGGAGAGAGGACTTGTCCCTCGTGGGTGGTGGTTCTTTATAGAAAAAATCGAAGCTTAGCAGCTCCTC
GAGGCCCGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTGCTTCCACTGCAAAA
AATGCTCCGTGA
ATGTCGGAGAAGTTCGACTGTCACTACTGCAGGGACCCCTTGCAGGGGAAGAAGTACGTGCAGAAGGATGGCCGTCACTG
CTGCCTGAAGTGCTTTGACAAGTTCTGCGCCAACACCTGCGTGGACTGCCGCAAGCCCATAAGCGCTGATGCCAAGGAGG
TGCATTATAAGAATCGCTACTGGCACGACAACTGCTTCCGCTGTGCCAAGTGCCTTCACCCCTTGGCCAGTGAGACCTTT
GTGTCCAAGGATGGCAAGATCCTGTGCAACAAGTGCGCTACTCGGGAGGACTCCCCCAGGTGCAAAGGGTGCTTCAAGGC
CATTGTGGCAGGAGACCAGAACGTGGAGTACAAGGGCACCGTCTGGCATAAAGACTGCTTCACCTGCAGCAACTGCAAGC
AAGTCATTGGGACCGGAAGCTTCTTCCCGAAAGGGGAGGACTTCTACTGTGTGACTTGCCATGAGACCAAGTTCGCCAAA
CATTGCGTGAAGTGCAACAAGGCCATCACATCTGGAGGAATCACTTACCAGGATCAGCCCTGGCATGCCGAGTGCTTTGT
GTGTGTTACCTGCTCTAAGAAGCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTATTACTGCGTGGATTGCTACA
AGAACTTTGTGGCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGGAAAAGGACTGTGTCAAGAGTGAGCCACCCA
GTCTCTAAAGCTAGGAAGTCCCCAGTGTGCCACGGGAAACGCTTGCCTCTCACCCTGTTTCCCAGCGCCAACCTCCGGGG
CAGGCATCCGGGTGGAGAGAGGACTTGTCCCTCGTGGGTGGTGGTTCTTTATAGAAAAAATCGAAGCTTAGCAGCTCCTC
GAGGCCCGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTGCTTCCACTGCAAAA
AATGCTCCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 93 .85 RPM |
| SRP007412_cerebellum | 83 .54 RPM |
| SRP007412_heart | 86 .45 RPM |
| SRP007412_kidney | 138 .08 RPM |
| SRP007412_liver | 4 .26 RPM |
| SRP007412_testis | 8 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000015644 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000022267 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010054 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000009342 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000014336 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000007922 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002560 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020761 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000875 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_51 | 69.31 | 98.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000023092 retrocopies