Parental gene: | TRNT1, ENSG00000072756 |
| Aliases: | TRNT1, CCA1, MtCCA |
| Description: | tRNA nucleotidyl transferase, CCA-adding, 1 [Source:HGNC Symbol;Acc:17341] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 3:3168599..3192563(+) |
>ENSG00000072756
ATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGGTGGAGTAGGCTGTGCCTTCCGAAGCAGTATCT
ATTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGAATTATTTGTCA
AAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAGTAAAGCCTCAGGATATAGATTTT
GCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAA
GCACGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGATTACTACACTACGGATTGATGTCACCACTGATGGAA
GACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTA
GGTTTTGATGGCACTTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGC
TAAACAGAGAATACAAGAGGATTATCTTAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTG
ACCATGATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTG
GAACTGAAAAAAATTCTTGTTGGTAACCATGTAAATCATTTGATTCACCTTATCTATGATCTTGATGTGGCTCCTTATAT
AGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGATGGTTTTTCACCAAAGCCAGTGA
CTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGATCGCAAAAGAGGAGAAA
AACCTTGGCTTATTTATAGTTAAAAATAGGAAAGATTTAATTAAAGCAACAGATAGTTCAGACCCATTGAAACCCTATCA
AGACTTCATTATAGATTCTAGGGAACCTGATGCAACTACTCGTGTATGTGAACTACTGAAGTACCAAGGAGAGCACTGTC
TCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCA
GGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACT
TCTGAGTTACATAAAGAAGACCTAA
ATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGGTGGAGTAGGCTGTGCCTTCCGAAGCAGTATCT
ATTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGAATTATTTGTCA
AAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAGTAAAGCCTCAGGATATAGATTTT
GCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAA
GCACGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGATTACTACACTACGGATTGATGTCACCACTGATGGAA
GACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTA
GGTTTTGATGGCACTTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGC
TAAACAGAGAATACAAGAGGATTATCTTAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTG
ACCATGATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTG
GAACTGAAAAAAATTCTTGTTGGTAACCATGTAAATCATTTGATTCACCTTATCTATGATCTTGATGTGGCTCCTTATAT
AGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGATGGTTTTTCACCAAAGCCAGTGA
CTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGATCGCAAAAGAGGAGAAA
AACCTTGGCTTATTTATAGTTAAAAATAGGAAAGATTTAATTAAAGCAACAGATAGTTCAGACCCATTGAAACCCTATCA
AGACTTCATTATAGATTCTAGGGAACCTGATGCAACTACTCGTGTATGTGAACTACTGAAGTACCAAGGAGAGCACTGTC
TCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCA
GGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACT
TCTGAGTTACATAAAGAAGACCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 8 .03 RPM |
| bodymap2_lung | 13 .73 RPM |
| bodymap2_breast | 16 .95 RPM |
| bodymap2_adipose | 12 .96 RPM |
| bodymap2_adrenal | 22 .68 RPM |
| bodymap2_skeletal_muscle | 6 .42 RPM |
| bodymap2_thyroid | 21 .52 RPM |
| bodymap2_prostate | 20 .97 RPM |
| bodymap2_colon | 17 .03 RPM |
| bodymap2_testis | 19 .95 RPM |
| bodymap2_brain | 14 .63 RPM |
| bodymap2_heart | 9 .82 RPM |
| bodymap2_white_blood_cells | 18 .68 RPM |
| bodymap2_lymph_node | 20 .72 RPM |
| bodymap2_ovary | 22 .32 RPM |
| bodymap2_kidney | 30 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015466 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008837 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018177 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015286 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003226 | ortholog_one2one | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000002236 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013702 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000014564 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_246 | 74.89 | 50.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2598 | 68.95 | 55.99 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000072756 retrocopies