Parental gene: | CLNS1A, ENSG00000074201 |
| Aliases: | CLNS1A, CLCI, CLNS1B, ICln |
| Description: | chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:77225980..77348850(-) |
>ENSG00000074201
ATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCT
GAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGCCGCCTGTCTTGGTTAGATGGCTCTGGATTAGGAT
TCTCACTGGAATACCCCACCATTAGTTTACATGCATTATCCAGGGACCGAAGTGACTGTCTAGGAGAGCATTTGTATGTT
ATGGTGAATGCCAAATTTGAAGAAGAATCAAAAGAACCTGTTGCTGATGAAGAAGAGGAAGACAGTGATGATGATGTTGA
ACCTATTACTGAATTTAGATTTGTGCCTAGTGATAAATCAGCGTTGGAGGCAATGTTCACTGCAATGTGCGAATGCCAGG
CCTTGCATCCAGATCCTGAGGATGAGGATTCAGATGACTACGATGGAGAAGAATATGATGTGGAAGCACATGAACAAGGA
CAGGGGGACATCCCTACATTTTACACCTATGAAGAAGGATTATCCCATCTAACAGCAGAAGGCCAAGCCACACTGGAGAG
ATTAGAAGGAATGCTTTCTCAGTCTGTGAGCAGCCAGTATAATATGGCTGGGGTCAGGACAGAAGATTCAATAAGAGATT
ATGAAGATGGGATGGAGGTGGATACCACACCAACAGTTGCTGGACAGTTTGAGGATGCAGATGTTGATCACTGA
ATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCT
GAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGCCGCCTGTCTTGGTTAGATGGCTCTGGATTAGGAT
TCTCACTGGAATACCCCACCATTAGTTTACATGCATTATCCAGGGACCGAAGTGACTGTCTAGGAGAGCATTTGTATGTT
ATGGTGAATGCCAAATTTGAAGAAGAATCAAAAGAACCTGTTGCTGATGAAGAAGAGGAAGACAGTGATGATGATGTTGA
ACCTATTACTGAATTTAGATTTGTGCCTAGTGATAAATCAGCGTTGGAGGCAATGTTCACTGCAATGTGCGAATGCCAGG
CCTTGCATCCAGATCCTGAGGATGAGGATTCAGATGACTACGATGGAGAAGAATATGATGTGGAAGCACATGAACAAGGA
CAGGGGGACATCCCTACATTTTACACCTATGAAGAAGGATTATCCCATCTAACAGCAGAAGGCCAAGCCACACTGGAGAG
ATTAGAAGGAATGCTTTCTCAGTCTGTGAGCAGCCAGTATAATATGGCTGGGGTCAGGACAGAAGATTCAATAAGAGATT
ATGAAGATGGGATGGAGGTGGATACCACACCAACAGTTGCTGGACAGTTTGAGGATGCAGATGTTGATCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 35 .78 RPM |
| bodymap2_lung | 34 .32 RPM |
| bodymap2_breast | 40 .29 RPM |
| bodymap2_adipose | 36 .12 RPM |
| bodymap2_adrenal | 44 .71 RPM |
| bodymap2_skeletal_muscle | 22 .97 RPM |
| bodymap2_thyroid | 67 .11 RPM |
| bodymap2_prostate | 53 .64 RPM |
| bodymap2_colon | 47 .70 RPM |
| bodymap2_testis | 63 .03 RPM |
| bodymap2_brain | 57 .29 RPM |
| bodymap2_heart | 31 .03 RPM |
| bodymap2_white_blood_cells | 78 .10 RPM |
| bodymap2_lymph_node | 44 .70 RPM |
| bodymap2_ovary | 94 .28 RPM |
| bodymap2_kidney | 36 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019930 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004900 | possible_ortholog | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014927 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000005260 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000026321 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003091 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005935 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000025439 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016699 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000024393 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003712 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000009460 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027980 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3010 | 83.26 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3595 | 81.34 | 87.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000074201 retrocopies