Parental gene:

CLNS1A, ENSPPYG00000003712

Aliases:CLNS1A, ICLN
Description:methylosome subunit pICln [Source:RefSeq peptide;Acc:NP_001126440]
Organism:Orangutan (Pongo abelii)
Coordinates:11:73106997..73130773(-)


>ENSPPYG00000003712
ATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCGGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCT
GAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGCCGCCTGTCTTGGTTAGATGGCTCTGGATTAGGAT
TCTCACTGGAATACCCCACCATTAGTTTACATGCATTATCCAGGGACCGAAGTGACTGTCTAGGAGAGCATTTGTATGTT
ATGGTGAATGCCAAATTTGAAGAAGAATCAAAAGAACCTGTTGCTGATGAAGAAGAGGAAGACAGTGATGATGATGTTGA
ACCTATTACTGAATTTAGATTTGTGCCTAGTGATAAATCAGCGTTGGAGGCAATGTTCACTGCAATGTGTGAATGCCAGG
CCTTGCATCCCGATCCTGAGGATGAGGATTCAGATGACTACGATGGAGAAGAATATGATGTGGAAGCACATGAACAAGGA
CAGGGGGACATCCCTACATTTTACACCTATGAAGAAGGATTATCCCATCTAACAGCAGAAGGCCAAGCCACACTGGAGAG
ATTAGAAGGAATGCTTTCTCAGTCTGTGAGCAGCCAGTATAATATGGCTGGGGTCAGGACAGAAGATTCAATAAGAGATT
ATGAAGATGGGATGGAGGTGGATACCACACCAACAGTTGCTGGACAGTTTGAGGATGCAGATGTTGATCACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 35 .39 RPM
SRP007412_cerebellum 42 .20 RPM
SRP007412_heart 24 .05 RPM
SRP007412_kidney 23 .97 RPM
SRP007412_liver 24 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019930 ortholog_one2one 1 retrogene
retro_btau_376,
Canis familiaris ENSCAFG00000004900 possible_ortholog 6 retrogenes
retro_cfam_1112, retro_cfam_1448, retro_cfam_255, retro_cfam_327, retro_cfam_720, retro_cfam_727,
Callithrix jacchus ENSCJAG00000014927 ortholog_one2one 1 retrogene
retro_cjac_4085,
Cavia porcellus ENSCPOG00000005260 ortholog_one2many 1 retrogene
retro_cpor_67,
Felis catus ENSFCAG00000026321 possible_ortholog 1 retrogene
retro_fcat_736,
Homo sapiens ENSG00000074201 ortholog_one2one 2 retrogenes
retro_hsap_3010, retro_hsap_3595,
Gorilla gorilla ENSGGOG00000003091 ortholog_one2one 1 retrogene
retro_ggor_2084,
Macropus eugenii ENSMEUG00000005935 ortholog_one2one 4 retrogenes
retro_meug_1825, retro_meug_2097, retro_meug_783, retro_meug_929,
Mus musculus ENSMUSG00000025439 ortholog_one2one 1 retrogene
retro_mmus_1984,
Nomascus leucogenys ENSNLEG00000016699 ortholog_one2one 2 retrogenes
retro_nleu_300, retro_nleu_756,
Oryctolagus cuniculus ENSOCUG00000024393 ortholog_one2many 1 retrogene
retro_ocun_1303,
Sorex araneus ENSSARG00000009460 ortholog_one2one 2 retrogenes
retro_sara_247, retro_sara_682,
Ictidomys tridecemlineatus ENSSTOG00000027980 ortholog_one2one 3 retrogenes
retro_itri_239, retro_itri_319, retro_itri_490,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2494 78.57 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000003712 retrocopies