Parental gene:

PSMA6, ENSG00000100902

Aliases:PSMA6, IOTA, PROS27, p27K
Description:proteasome (prosome, macropain) subunit, alpha type, 6 [Source:HGNC Symbol;Acc:9535]
Organism:Human (Homo sapiens)
Coordinates:14:35747838..35786699(+)


>ENSG00000100902
ATGTCCCGTGGTTCCAGCGCCGGTTTTGACCGCCACATTACCATTTTTTCACCCGAGGGTCGGCTCTACCAAGTAGAATA
TGCTTTTAAGGCTATTAACCAGGGTGGCCTTACATCAGTAGCTGTCAGAGGGAAAGACTGTGCAGTAATTGTCACACAGA
AGAAAGTACCTGACAAATTATTGGATTCCAGCACAGTGACTCACTTATTCAAGATAACTGAAAACATTGGTTGTGTGATG
ACCGGAATGACAGCTGACAGCAGATCCCAGGTACAGAGGGCACGCTATGAGGCAGCTAACTGGAAATACAAGTATGGCTA
TGAGATTCCTGTGGACATGCTGTGTAAAAGAATTGCCGATATTTCTCAGGTCTACACACAGAATGCTGAAATGAGGCCTC
TTGGTTGTTGTATGATTTTAATTGGTATAGATGAAGAGCAAGGCCCTCAGGTATATAAGTGTGATCCTGCAGGTTACTAC
TGTGGGTTTAAAGCCACTGCAGCGGGAGTTAAACAAACTGAGTCAACCAGCTTCCTTGAAAAAAAAGTGAAGAAGAAATT
TGATTGGACATTTGAACAGACAGTGGAAACTGCAATTACATGCCTGTCTACTGTTCTATCAATTGATTTCAAACCTTCAG
AAATAGAAGTTGGAGTAGTGACAGTTGAAAATCCTAAATTCAGGATTCTTACAGAAGCAGAGATTGATGCTCACCTTGTT
GCTCTAGCAGAGAGAGACTAA

Library Parental gene expression (RPM)
bodymap2_adipose 32 .24 RPM
bodymap2_adrenal 28 .02 RPM
bodymap2_brain 18 .92 RPM
bodymap2_breast 23 .64 RPM
bodymap2_colon 18 .64 RPM
bodymap2_heart 9 .91 RPM
bodymap2_kidney 10 .96 RPM
bodymap2_liver 8 .18 RPM
bodymap2_lung 17 .99 RPM
bodymap2_lymph_node 16 .03 RPM
bodymap2_ovary 22 .79 RPM
bodymap2_prostate 9 .30 RPM
bodymap2_skeletal_muscle 26 .68 RPM
bodymap2_testis 30 .56 RPM
bodymap2_thyroid 39 .17 RPM
bodymap2_white_blood_cells 14 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013409 ortholog_one2one 2 retrogenes
retro_cfam_1581, retro_cfam_743,
Echinops telfairi ENSETEG00000004892 ortholog_one2one 1 retrogene
retro_etel_1775,
Felis catus ENSFCAG00000026276 ortholog_one2one 1 retrogene
retro_fcat_973,
Macropus eugenii ENSMEUG00000016537 ortholog_one2one 1 retrogene
retro_meug_1217,
Microcebus murinus ENSMICG00000000083 ortholog_one2one 4 retrogenes
retro_mmur_104, retro_mmur_165, retro_mmur_752, retro_mmur_80,
Myotis lucifugus ENSMLUG00000010228 ortholog_one2one 1 retrogene
retro_mluc_822,
Macaca mulatta ENSMMUG00000016544 ortholog_one2many 1 retrogene
retro_mmul_343,
Mustela putorius furo ENSMPUG00000016288 ortholog_one2one 1 retrogene
retro_mputfur_1089,
Mus musculus ENSMUSG00000021024 ortholog_one2one 1 retrogene
retro_mmus_654,
Otolemur garnettii ENSOGAG00000008492 ortholog_one2one 10 retrogenes
retro_ogar_1273, retro_ogar_1397, retro_ogar_1928, retro_ogar_1950, retro_ogar_2021, retro_ogar_2073, retro_ogar_2274, retro_ogar_2488, retro_ogar_2521, retro_ogar_3089,
Pan troglodytes ENSPTRG00000006264 ortholog_one2one 2 retrogenes
retro_ptro_3297, retro_ptro_844,
Rattus norvegicus ENSRNOG00000007114 ortholog_one2one 4 retrogenes
retro_rnor_1724, retro_rnor_1960, retro_rnor_854, retro_rnor_924,
Tupaia belangeri ENSTBEG00000011241 ortholog_one2one 17 retrogenes
retro_tbel_1304, retro_tbel_1415, retro_tbel_1789, retro_tbel_2028, retro_tbel_2466, retro_tbel_2519, retro_tbel_3227, retro_tbel_3280, retro_tbel_3535, retro_tbel_4181, retro_tbel_4183, retro_tbel_4357, retro_tbel_4465, retro_tbel_4495, retro_tbel_509, retro_tbel_602, retro_tbel_725,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1228 78.06 96.06
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_4923 94.72 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000100902 retrocopies