Parental gene:

NFYB, ENSG00000120837

Aliases:NFYB, CBF-A, CBF-B, HAP3, NF-YB
Description:nuclear transcription factor Y, beta [Source:HGNC Symbol;Acc:7805]
Organism:Human (Homo sapiens)
Coordinates:12:104510854..104532067(-)


>ENSG00000120837
ATGACAATGGATGGTGACAGTTCTACAACAGATGCTTCTCAACTAGGAATCTCTGCAGACTATATTGGAGGAAGTCATTA
TGTTATACAGCCTCATGATGATACTGAGGACAGCATGAATGATCATGAAGACACAAATGGTTCAAAAGAAAGTTTCAGAG
AACAAGATATATATCTTCCAATAGCAAACGTGGCTAGGATAATGAAAAATGCCATACCTCAAACGGGAAAGATTGCAAAA
GATGCCAAAGAATGTGTTCAAGAATGTGTAAGTGAGTTCATCAGTTTTATAACATCTGAAGCAAGTGAAAGGTGCCATCA
AGAGAAACGGAAAACAATCAATGGAGAAGATATTCTCTTTGCTATGTCTACTTTAGGCTTTGACAGTTATGTGGAACCTC
TGAAATTATACCTTCAGAAATTCAGAGAGGCTATGAAAGGAGAAAAGGGAATTGGTGGAGCAGTCACAGCTACAGATGGA
CTAAGTGAAGAGCTTACAGAGGAGGCATTTACTAACCAGTTACCAGCTGGCTTAATAACCACAGACGGTCAACAACAAAA
TGTTATGGTTTACACAACATCATATCAACAGATTTCTGGTGTTCAGCAAATTCAGTTTTCATGA

Library Parental gene expression (RPM)
bodymap2_liver 14 .77 RPM
bodymap2_lung 50 .55 RPM
bodymap2_breast 39 .44 RPM
bodymap2_adipose 33 .08 RPM
bodymap2_adrenal 45 .83 RPM
bodymap2_skeletal_muscle 28 .57 RPM
bodymap2_thyroid 48 .57 RPM
bodymap2_prostate 81 .23 RPM
bodymap2_colon 99 .12 RPM
bodymap2_testis 84 .78 RPM
bodymap2_brain 60 .41 RPM
bodymap2_heart 42 .76 RPM
bodymap2_white_blood_cells 31 .19 RPM
bodymap2_lymph_node 76 .48 RPM
bodymap2_ovary 70 .19 RPM
bodymap2_kidney 49 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006686 ortholog_one2one 1 retrogene
retro_amel_940,
Bos taurus ENSBTAG00000030744 ortholog_one2one 1 retrogene
retro_btau_1681,
Canis familiaris ENSCAFG00000029177 ortholog_one2one 1 retrogene
retro_cfam_1677,
Callithrix jacchus ENSCJAG00000014610 ortholog_one2one 1 retrogene
retro_cjac_1133,
Cavia porcellus ENSCPOG00000003213 ortholog_one2one 1 retrogene
retro_cpor_901,
Felis catus ENSFCAG00000026471 ortholog_one2one 1 retrogene
retro_fcat_207,
Gorilla gorilla ENSGGOG00000008866 ortholog_one2one 1 retrogene
retro_ggor_2714,
Myotis lucifugus ENSMLUG00000005468 ortholog_one2one 1 retrogene
retro_mluc_1764,
Macaca mulatta ENSMMUG00000022570 ortholog_one2one 3 retrogenes
retro_mmul_1433, retro_mmul_2119, retro_mmul_2335,
Mustela putorius furo ENSMPUG00000012064 ortholog_one2one 3 retrogenes
retro_mputfur_1531, retro_mputfur_1563, retro_mputfur_1567,
Nomascus leucogenys ENSNLEG00000006543 ortholog_one2one 2 retrogenes
retro_nleu_1203, retro_nleu_2061,
Oryctolagus cuniculus ENSOCUG00000004415 ortholog_one2one 4 retrogenes
retro_ocun_1334, retro_ocun_1816, retro_ocun_1824, retro_ocun_1845,
Ochotona princeps ENSOPRG00000008117 ortholog_one2one 2 retrogenes
retro_opri_36, retro_opri_657,
Ictidomys tridecemlineatus ENSSTOG00000005279 ortholog_one2one 1 retrogene
retro_itri_1851,
Tupaia belangeri ENSTBEG00000005731 ortholog_one2one 1 retrogene
retro_tbel_4360,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2827 90.16 58.94
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2. retro_hsap_4047 65.43 76.81
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Download FASTA sequences of all ENSG00000120837 retrocopies