RetrogeneDB ID: | retro_mluc_1764 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429904:2693586..2693954(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NFYB | ||
Ensembl ID: | ENSMLUG00000005468 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.87 % |
Parental protein coverage: | 60. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | TNGSKESFREQDIY-LPIANVARIMKNAIPQTGKIAKDAKECVQECVS-EFISFITSEASERCHQEKRKT |
TNGSKESFREQDIY.LPIAN..RIMK.......K..K.............FISFITSEA.E.CHQEK.K. | |
Retrocopy | TNGSKESFREQDIY<LPIANLSRIMKKCHTSNRKDCKRCQKMCSRMDT<KFISFITSEATEGCHQEKWKP |
Parental | INGEDILFAMSTLGFDSYVEPLK-LYLQKFREAMKGEKGIGGAVTTADGLSEELTE |
INGEDILFAMS.LGFDSY.EPLK.LYL.K.REAM.GEKGI..AVT..D.LS.E..E | |
Retrocopy | INGEDILFAMSILGFDSYAEPLK>LYLWKIREAMEGEKGIVRAVTATDELSKEPIE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000006686 | 1 retrocopy | |
Bos taurus | ENSBTAG00000030744 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000029177 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000014610 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000003213 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000009984 | 3 retrocopies | |
Felis catus | ENSFCAG00000026471 | 1 retrocopy | |
Homo sapiens | ENSG00000120837 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000008866 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000005468 | 1 retrocopy |
retro_mluc_1764 ,
|
Macaca mulatta | ENSMMUG00000022570 | 3 retrocopies | |
Mustela putorius furo | ENSMPUG00000012064 | 3 retrocopies | |
Nomascus leucogenys | ENSNLEG00000006543 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000004415 | 4 retrocopies | |
Ochotona princeps | ENSOPRG00000008117 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000004892 | 3 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000005279 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000005731 | 1 retrocopy |