Parental gene:

CAP1, ENSG00000131236

Aliases:CAP1, CAP, CAP1-PEN
Description:CAP, adenylate cyclase-associated protein 1 (yeast) [Source:HGNC Symbol;Acc:20040]
Organism:Human (Homo sapiens)
Coordinates:1:40505904..40538321(+)


>ENSG00000131236
ATGGCTGACATGCAAAATCTGGTAGAAAGATTGGAGAGGGCAGTGGGCCGCCTGGAGGCAGTATCTCATACCTCTGACAT
GCACCGTGGGTATGCAGACAGTCCTTCAAAAGCAGGAGCAGCTCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGTC
CTGTGGCAGAGTACTTGAAGATCAGTAAAGAGATTGGGGGAGACGTGCAGAAACATGCGGAGATGGTCCACACAGGTTTG
AAGTTGGAGCGAGCTCTGTTGGTTACAGCTTCTCAGTGTCAACAGCCAGCAGAAAATAAGCTTTCCGATTTGTTGGCACC
CATCTCAGAGCAGATCAAAGAAGTGATAACCTTTCGGGAGAAGAACCGAGGCAGCAAGTTGTTTAATCACCTGTCAGCTG
TCAGCGAAAGTATCCAGGCCCTGGGCTGGGTGGCTATGGCTCCCAAGCCTGGCCCTTATGTGAAAGAAATGAATGATGCC
GCCATGTTTTATACAAACCGAGTCCTCAAAGAGTACAAAGATGTGGATAAGAAGCATGTAGACTGGGTCAAAGCTTATTT
AAGTATATGGACAGAGCTGCAGGCTTACATTAAGGAGTTCCATACCACCGGACTGGCCTGGAGCAAAACGGGGCCTGTGG
CAAAAGAACTGAGCGGACTGCCATCTGGACCCTCTGCCGGATCATGTCCTCCTCCCCCTCCACCATGCCCCCCTCCTCCC
CCAGTCTCTACCATTTCATGCTCATATGAGTCTGCTTCCCGCTCATCACTGTTCGCGCAGATTAATCAGGGGGAGAGCAT
TACACATGCCCTGAAACATGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGAAGGCTCAGAGTGGTCCAGTAC
GCAGTGGCCCCAAACCATTCTCTGCACCTAAACCCCAAACCAGCCCATCCCCCAAACGAGCCACAAAGAAGGAGCCAGCT
GTACTTGAACTGGAGGGCAAGAAGTGGAGAGTGGAAAATCAGGAAAATGTTTCCAACCTGGTGATTGAGGACACAGAGCT
GAAACAGGTGGCTTACATATACAAGTGTGTCAACACGACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGATA
ACTGTAAGAAACTTGGCCTGGTATTCGATGACGTGGTGGGCATTGTGGAGATAATCAACAGTAAGGATGTCAAAGTTCAG
GTAATGGGTAAAGTGCCAACCATATCCATCAACAAAACAGATGGCTGCCATGCTTACCTGAGCAAGAATTCCCTGGATTG
TGAAATAGTCAGTGCCAAATCTTCCGAGATGAATGTCCTCATTCCTACAGAAGGCGGTGACTTTAATGAATTCCCAGTTC
CTGAGCAGTTCAAGACCCTATGGAACGGGCAGAAGTTGGTCACCACAGTGACAGAAATTGCTGGATAA

Library Parental gene expression (RPM)
bodymap2_liver 111 .66 RPM
bodymap2_lung 315 .68 RPM
bodymap2_breast 190 .57 RPM
bodymap2_adipose 276 .64 RPM
bodymap2_adrenal 304 .28 RPM
bodymap2_skeletal_muscle 39 .90 RPM
bodymap2_thyroid 199 .74 RPM
bodymap2_prostate 294 .60 RPM
bodymap2_colon 234 .35 RPM
bodymap2_testis 220 .41 RPM
bodymap2_brain 141 .53 RPM
bodymap2_heart 75 .08 RPM
bodymap2_white_blood_cells 1027 .25 RPM
bodymap2_lymph_node 271 .53 RPM
bodymap2_ovary 237 .16 RPM
bodymap2_kidney 259 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003012 possible_ortholog 2 retrogenes
retro_cfam_1316, retro_cfam_645,
Homo sapiens ENSG00000112186 within_species_paralog 1 retrogene
retro_hsap_1451,
Gorilla gorilla ENSGGOG00000027527 ortholog_one2one 2 retrogenes
retro_ggor_1860, retro_ggor_575,
Macropus eugenii ENSMEUG00000004960 ortholog_one2one 1 retrogene
retro_meug_544,
Mus musculus ENSMUSG00000028656 ortholog_one2one 1 retrogene
retro_mmus_1265,
Nomascus leucogenys ENSNLEG00000012077 ortholog_one2one 2 retrogenes
retro_nleu_1600, retro_nleu_2221,
Otolemur garnettii ENSOGAG00000005492 ortholog_one2one 1 retrogene
retro_ogar_299,
Pongo abelii ENSPPYG00000001496 ortholog_one2one 4 retrogenes
retro_pabe_2212, retro_pabe_2358, retro_pabe_2415, retro_pabe_584,
Pan troglodytes ENSPTRG00000000583 ortholog_one2one 2 retrogenes
retro_ptro_1796, retro_ptro_484,
Rattus norvegicus ENSRNOG00000013492 ortholog_one2one 1 retrogene
retro_rnor_1180,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_664 88.06 64.84
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2. retro_hsap_2666 88.58 91.58
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Download FASTA sequences of all ENSG00000131236 retrocopies