Parental gene:

PSME3, ENSG00000131467

Aliases:PSME3, HEL-S-283, Ki, PA28-gamma, PA28G, PA28gamma, REG-GAMMA
Description:proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) [Source:HGNC Symbol;Acc:9570]
Organism:Human (Homo sapiens)
Coordinates:17:40976401..40995774(+)


>ENSG00000131467
ATGGCCTCGTTGCTGAAGGTGGATCAGGAAGTGAAGCTCAAGGTTGATTCTTTCAGGGAGCGGATCACAAGTGAGGCAGA
AGACTTGGTGGCAAATTTTTTCCCAAAGAAGTTATTAGAACTTGATAGTTTTCTGAAGGAACCAATCTTAAACATCCATG
ACCTAACTCAGATCCACTCTGACATGAATCTCCCAGTCCCTGACCCCATTCTTCTCACCAATAGCCATGATGGACTGGAT
GGTCCCACTTATAAGAAGCGAAGGTTGGATGAGTGTGAAGAAGCCTTCCAAGGAACCAAGGTGTTTGTGATGCCCAATGG
GATGCTGAAAAGCAACCAGCAGCTGGTGGACATTATTGAGAAAGTGAAACCTGAGATCCGGCTGTTGATTGAGAAATGTA
ACACGCCTTCAGGCAAAGGTCCTCATATATGTTTTGACCTCCAGGTCAAAATGTGGGTACAGCTCCTGATTCCCAGGATA
GAAGATGGAAACAACTTTGGGGTGTCCATTCAGGAGGAAACAGTTGCAGAGCTAAGAACTGTTGAGAGTGAAGCTGCATC
TTATCTGGACCAGATTTCTAGATATTATATTACAAGAGCCAAATTGGTTTCTAAAATAGCTAAATATCCCCATGTGGAGG
ACTATCGCCGCACCGTGACAGAGATTGATGAGAAAGAATATATCAGCCTTCGGCTCATCATATCAGAGCTGAGGAATCAA
TATGTCACTCTACATGACATGATCCTGAAAAATATCGAGAAGATCAAACGGCCCCGGAGCAGCAATGCAGAGACTCTGTA
CTGA

Library Parental gene expression (RPM)
bodymap2_liver 62 .25 RPM
bodymap2_lung 50 .25 RPM
bodymap2_breast 83 .52 RPM
bodymap2_adipose 84 .60 RPM
bodymap2_adrenal 93 .93 RPM
bodymap2_skeletal_muscle 60 .00 RPM
bodymap2_thyroid 115 .96 RPM
bodymap2_prostate 72 .87 RPM
bodymap2_colon 67 .00 RPM
bodymap2_testis 101 .22 RPM
bodymap2_brain 64 .23 RPM
bodymap2_heart 47 .85 RPM
bodymap2_white_blood_cells 146 .04 RPM
bodymap2_lymph_node 62 .22 RPM
bodymap2_ovary 113 .77 RPM
bodymap2_kidney 123 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013688 ortholog_one2many 2 retrogenes
retro_acar_118, retro_acar_37,
Bos taurus ENSBTAG00000019918 ortholog_one2one 2 retrogenes
retro_btau_1249, retro_btau_941,
Callithrix jacchus ENSCJAG00000013111 ortholog_one2one 1 retrogene
retro_cjac_2307,
Cavia porcellus ENSCPOG00000012552 ortholog_one2one 1 retrogene
retro_cpor_1204,
Equus caballus ENSECAG00000012620 ortholog_one2many 2 retrogenes
retro_ecab_29, retro_ecab_827,
Homo sapiens ENSG00000100911 within_species_paralog 4 retrogenes
retro_hsap_1200, retro_hsap_2999, retro_hsap_3033, retro_hsap_3222,
Loxodonta africana ENSLAFG00000013446 ortholog_one2one 1 retrogene
retro_lafr_725,
Mustela putorius furo ENSMPUG00000010027 ortholog_one2one 1 retrogene
retro_mputfur_619,
Oryctolagus cuniculus ENSOCUG00000015986 ortholog_one2one 1 retrogene
retro_ocun_641,
Pongo abelii ENSPPYG00000008372 ortholog_one2one 1 retrogene
retro_pabe_413,
Pan troglodytes ENSPTRG00000009225 ortholog_one2one 1 retrogene
retro_ptro_212,
Sus scrofa ENSSSCG00000017385 ortholog_one2one 1 retrogene
retro_sscr_784,
Ictidomys tridecemlineatus ENSSTOG00000028833 ortholog_one2one 1 retrogene
retro_itri_153,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_245 64.63 55.47
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000131467 retrocopies