Parental gene:

C18orf21, ENSG00000141428

Aliases:C18orf21, HsT3108, PNAS-131, XTP13
Description:chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:28802]
Organism:Human (Homo sapiens)
Coordinates:18:33552045..33559241(+)


>ENSG00000141428
ATGAGACAGAAGCACTACCTTGAGGCTGCAGCGCGGGGACTGCACGACAGCTGCCCGGGCCAAGCCCGCTACCTCCTCTG
GGCCTACACTTCGTCGCACGATGATAAGAGCACTTTTGAAGAAACGTGTCCATACTGTTTCCAGCTGTTGGTTCTGGATA
ACTCTCGAGTGCGTCTCAAACCCAAAGCCAGGTTGACACCCAAAATACAGAAACTTCTTAATCGAGAAGCGAGAAACTAT
ACACTCAGTTTTAAAGAAGCAAAAATGGTGAAAAAGTTCAAAGACTCCAAAAGTGTATTGTTGATCACTTGTAAAACATG
CAACAGAACAGTGAAACATCATGGTAAAAGTAGAAGCTTTGTGTCAACATTGAAGAGCAATCCTGCCACTCCTACAAGTA
AACTCAGCCTGAAGACACCAGAGAGAAGGACTGCAAACCCAAATCATGACATGTCTGGCTCGAAAGGCAAGAGCCCAGCA
TCGGTTTTCAGAACACCTACATCTGGACAGTCAGTATCTACTTGCTCCTCAAAGAACACCAGCAAAACAAAGAAACACTT
CTCTCAACTAAAAATGTTACTTAGTCAGAATGAATCCCAAAAGATTCCAAAGGTGGACTTCAGAAATTTCTTATCTTCTC
TGAAGGGTGGACTTTTAAAATAA

Library Parental gene expression (RPM)
bodymap2_liver 6 .06 RPM
bodymap2_lung 4 .83 RPM
bodymap2_breast 7 .37 RPM
bodymap2_adipose 5 .55 RPM
bodymap2_adrenal 10 .13 RPM
bodymap2_skeletal_muscle 13 .79 RPM
bodymap2_thyroid 10 .70 RPM
bodymap2_prostate 8 .71 RPM
bodymap2_colon 7 .89 RPM
bodymap2_testis 25 .51 RPM
bodymap2_brain 7 .31 RPM
bodymap2_heart 6 .42 RPM
bodymap2_white_blood_cells 10 .59 RPM
bodymap2_lymph_node 8 .10 RPM
bodymap2_ovary 8 .40 RPM
bodymap2_kidney 8 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029548 ortholog_one2one 1 retrogene
retro_cfam_1636,
Callithrix jacchus ENSCJAG00000021041 ortholog_one2one 2 retrogenes
retro_cjac_1030, retro_cjac_2169,
Cavia porcellus ENSCPOG00000025449 ortholog_one2one 1 retrogene
retro_cpor_1461,
Felis catus ENSFCAG00000000626 ortholog_one2one 1 retrogene
retro_fcat_1717,
Gorilla gorilla ENSGGOG00000026334 ortholog_one2one 1 retrogene
retro_ggor_2102,
Macaca mulatta ENSMMUG00000018782 ortholog_one2one 1 retrogene
retro_mmul_1876,
Monodelphis domestica ENSMODG00000025605 ortholog_one2many 1 retrogene
retro_mdom_260,
Mus musculus ENSMUSG00000024273 ortholog_one2one 2 retrogenes
retro_mmus_1676, retro_mmus_610,
Nomascus leucogenys ENSNLEG00000006237 ortholog_one2one 1 retrogene
retro_nleu_1655,
Oryctolagus cuniculus ENSOCUG00000028046 ortholog_one2one 2 retrogenes
retro_ocun_1910, retro_ocun_435,
Ochotona princeps ENSOPRG00000011163 ortholog_one2one 2 retrogenes
retro_opri_1222, retro_opri_283,
Pongo abelii ENSPPYG00000009110 ortholog_one2one 1 retrogene
retro_pabe_2536,
Pan troglodytes ENSPTRG00000009973 ortholog_one2one 2 retrogenes
retro_ptro_1981, retro_ptro_2935,
Pteropus vampyrus ENSPVAG00000009174 ortholog_one2one 3 retrogenes
retro_pvam_1086, retro_pvam_1488, retro_pvam_629,
Tupaia belangeri ENSTBEG00000016670 ortholog_one2one 1 retrogene
retro_tbel_4056,
Tarsius syrichta ENSTSYG00000010817 ortholog_one2one 2 retrogenes
retro_tsyr_1675, retro_tsyr_1787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3062 80.77 70.45
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000141428 retrocopies