Parental gene: | C18ORF21, ENSPTRG00000009973 |
| Aliases: | None |
| Description: | Chromosome 18 open reading frame 21 [Source:UniProtKB/TrEMBL;Acc:K7CUG3] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 18:31759566..31766214(+) |
>ENSPTRG00000009973
ATGAGACAGAAGCACTACCTTGAGGCTGCAGCGCGGGGACTGCACGACAGCTGCCCGGGCCAAGCCCGCTACCTCCTCTG
GGCCTACACTTCGTCGCACGATGATAAGAGCACTTTTGAAGAAACGTGTCCATACTGTTTCCAGCTGTTGGTTCTGGATA
ACTCTCGAGTGCGTCTCAAACCCAAAGCCAAGTTGACACCCAAAATACAGAAACTTCTTAATCGAGAAGCGAGAAACTAT
ACACTCAGTTTTAAAGAAGCAAAAATGGTGAAAAAGTTCAAAGACTCCAAAAGTGTATTGTTGATCACTTGTAAAACATG
CAACAGAACAGTGAAACATCATGGTAAAAGTAGAAGCTTTCTGTCAACATTGAAGAGCAATCCTGCCACTCCTACAAGTA
AACTCAGCCTGAAGACACCAGAGAGAAGGACTGCAAACCCAAATCATGACATGTCTGGCTCGAAAGGCAAGAGCCCAGCA
TCGGTTTTCAGAACACCTACATCTGGACAGTCAGTATCTACTTGCTCCTCAAAGAACACCAGCAAAACAAAGAAACACTT
CTCTCAACTAAAAATGTTACTTAGTCAGAATGAATCCCAAAAGATTCCAAAGGTGGACTTCAGAAATTTCTTATCTTCTC
TGAAGGGTGGACTTAAATAA
ATGAGACAGAAGCACTACCTTGAGGCTGCAGCGCGGGGACTGCACGACAGCTGCCCGGGCCAAGCCCGCTACCTCCTCTG
GGCCTACACTTCGTCGCACGATGATAAGAGCACTTTTGAAGAAACGTGTCCATACTGTTTCCAGCTGTTGGTTCTGGATA
ACTCTCGAGTGCGTCTCAAACCCAAAGCCAAGTTGACACCCAAAATACAGAAACTTCTTAATCGAGAAGCGAGAAACTAT
ACACTCAGTTTTAAAGAAGCAAAAATGGTGAAAAAGTTCAAAGACTCCAAAAGTGTATTGTTGATCACTTGTAAAACATG
CAACAGAACAGTGAAACATCATGGTAAAAGTAGAAGCTTTCTGTCAACATTGAAGAGCAATCCTGCCACTCCTACAAGTA
AACTCAGCCTGAAGACACCAGAGAGAAGGACTGCAAACCCAAATCATGACATGTCTGGCTCGAAAGGCAAGAGCCCAGCA
TCGGTTTTCAGAACACCTACATCTGGACAGTCAGTATCTACTTGCTCCTCAAAGAACACCAGCAAAACAAAGAAACACTT
CTCTCAACTAAAAATGTTACTTAGTCAGAATGAATCCCAAAAGATTCCAAAGGTGGACTTCAGAAATTTCTTATCTTCTC
TGAAGGGTGGACTTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .84 RPM |
| SRP007412_cerebellum | 7 .21 RPM |
| SRP007412_heart | 5 .10 RPM |
| SRP007412_kidney | 9 .41 RPM |
| SRP007412_liver | 8 .12 RPM |
| SRP007412_testis | 31 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000029548 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000021041 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000025449 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000000626 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000141428 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026334 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018782 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000025605 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024273 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006237 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000028046 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000011163 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000009110 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000009174 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000016670 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000010817 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1981 | 82.69 | 70.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2935 | 82.05 | 70.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009973 retrocopies