Parental gene:

MRPL9, ENSG00000143436

Aliases:MRPL9, L9mt
Description:mitochondrial ribosomal protein L9 [Source:HGNC Symbol;Acc:14277]
Organism:Human (Homo sapiens)
Coordinates:1:151732118..151736040(-)


>ENSG00000143436
ATGGCGGCGCCCGTTGTCACGGCCCCGGGCAGAGCTCTGCTGCGGGCGGGCGCTGGACGGCTGCTTCGGGGAGGCGTCCA
GGAGCTACTGCGGCCGCGACATGAAGGGAACGCCCCTGACCTGGCCTGCAACTTCAGCCTTTCTCAAAATCGGGGCACGG
TCATCGTGGAGCGCTGGTGGAAGGTACCGCTGGCCGGGGAGGGCCGGAAGCCGCGCCTGCACCGGCGACATCGCGTCTAT
AAGCTGGTGGAGGACACGAAGCATCGGCCCAAAGAAAACCTGGAGCTCATCCTGACGCAGTCGGTGGAGAATGTTGGAGT
CCGGGGTGACCTGGTCTCAGTGAAGAAATCTTTAGGCCGGAATCGACTCCTTCCTCAGGGACTGGCTGTATATGCATCCC
CTGAAAACAAGAAGCTGTTTGAAGAGGAGAAATTGCTGAGACAAGAAGGAAAATTAGAGAAGATCCAGACCAAGGCAGGT
GAGGCGACAGTGAAATTTCTAAAAAGCTGTCGCCTGGAGGTAGGGATGAAGAACAATGTCAAATGGGAGCTGAACCCTGA
AATAGTTGCCCGCCACTTCTTTAAGAATCTTGGTGTTGTGGTTGCCCCACATACATTAAAGTTACCAGAAGAGCCTATCA
CACGGTGGGGCGAGTATTGGTGTGAGGTGACGGTAAATGGGCTTGATACTGTGAGAGTGCCTATGTCTGTCGTGAACTTT
GAGAAGCCCAAGACCAAAAGATATAAGTACTGGTTAGCCCAGCAAGCTGCCAAGGCTATGGCCCCCACCAGCCCCCAGAT
CTAA

Library Parental gene expression (RPM)
bodymap2_liver 14 .38 RPM
bodymap2_lung 14 .72 RPM
bodymap2_breast 26 .38 RPM
bodymap2_adipose 28 .17 RPM
bodymap2_adrenal 45 .46 RPM
bodymap2_skeletal_muscle 23 .41 RPM
bodymap2_thyroid 45 .95 RPM
bodymap2_prostate 30 .00 RPM
bodymap2_colon 31 .67 RPM
bodymap2_testis 34 .24 RPM
bodymap2_brain 22 .50 RPM
bodymap2_heart 10 .95 RPM
bodymap2_white_blood_cells 18 .39 RPM
bodymap2_lymph_node 22 .73 RPM
bodymap2_ovary 39 .71 RPM
bodymap2_kidney 25 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000258 possible_ortholog 1 retrogene
retro_chof_10,
Dasypus novemcinctus ENSDNOG00000011403 possible_ortholog 1 retrogene
retro_dnov_1989,
Gorilla gorilla ENSGGOG00000001902 ortholog_one2one 1 retrogene
retro_ggor_2735,
Loxodonta africana ENSLAFG00000006271 ortholog_one2many 2 retrogenes
retro_lafr_498, retro_lafr_563,
Nomascus leucogenys ENSNLEG00000010275 ortholog_one2one 1 retrogene
retro_nleu_2045,
Oryctolagus cuniculus ENSOCUG00000001383 ortholog_one2one 1 retrogene
retro_ocun_725,
Otolemur garnettii ENSOGAG00000030456 ortholog_one2many 1 retrogene
retro_ogar_159,
Pongo abelii ENSPPYG00000000857 ortholog_one2one 1 retrogene
retro_pabe_3347,
Pan troglodytes ENSPTRG00000001295 ortholog_one2one 2 retrogenes
retro_ptro_2765, retro_ptro_2996,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4078 78.43 76.03
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Download FASTA sequences of all ENSG00000143436 retrocopies