Parental gene:

MRPL9, ENSPPYG00000000857

Aliases:None
Description:mitochondrial ribosomal protein L9 [Source:HGNC Symbol;Acc:14277]
Organism:Orangutan (Pongo abelii)
Coordinates:1:99816406..99820933(+)


>ENSPPYG00000000857
ATGGCGGCGCCCGTTGTCACGGCCCCAGGCAGAGCTCTGCTGCGGGCGGGCGCTGGGCGGCTGCTGCGGGGAGGCGTCCA
GGAGCTACTGCGGCCGCGACATGAAGGGAACTCCCCTGACCTGGCCTGTAACTTCAGCCTCTCTCAAAATCGGGGCACGG
TCATCGTGGAGCGCTGGTGGAAGGTACCGCTGGCCGGGGAGGGCCGGAAGCCGCGCCTGCACCGGCGACATCGCGTCTAT
AAGCTGGTGGAGGACACGAAGCATCGGCCCAAAGAAAACCTGGAGCTCATCCTGACGCAGTCGGTGGAGAATGTTGGAGT
CCGGGGTGACCTGGTCTCAGTGAAGAAATCTTTGGGCCGGAATCGACTCCTTCCTCAGGGACTGGCTGTATATGCATCCC
CTGAAAACAGGAAGCTGTTTGAAGAGGAGAAATTGCTGAGACAAGAAGGAAAATTAGAGAAGATCCAGACCAAGGCAGGT
GAGGCGACAGTGAAATTTCTAAAAAGCTGTCGCCTGGAGGTAGGGATGAAGAACAATGTCAAATGGGAGCTGAACCCTGA
AATAGTTGCCCGCCACTTCTTCAAGAATCTTGGTGTTGTGGTTGCCCCACATACATTAAAGTTACCAGAAGAGCCTATCA
CACGGTGGGGCGAGTATTGGTGTGAGGTGACGGTAAATGGGCTTGATACTGTGAGAGTGCCTATGTCTGTCGTGAACTTT
GAGAAGCCCAAGACCAAAAGATATAAATACTGGTTAGCCCAGCAAGCTGCCAAGGCCATGGCCCCCACCAGCCCCCAGAT
CTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 42 .41 RPM
SRP007412_cerebellum 27 .48 RPM
SRP007412_heart 18 .57 RPM
SRP007412_kidney 41 .76 RPM
SRP007412_liver 32 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000258 possible_ortholog 1 retrogene
retro_chof_10,
Dasypus novemcinctus ENSDNOG00000011403 possible_ortholog 1 retrogene
retro_dnov_1989,
Homo sapiens ENSG00000143436 ortholog_one2one 1 retrogene
retro_hsap_4078,
Gorilla gorilla ENSGGOG00000001902 ortholog_one2one 1 retrogene
retro_ggor_2735,
Loxodonta africana ENSLAFG00000006271 ortholog_one2many 2 retrogenes
retro_lafr_498, retro_lafr_563,
Nomascus leucogenys ENSNLEG00000010275 ortholog_one2one 1 retrogene
retro_nleu_2045,
Oryctolagus cuniculus ENSOCUG00000001383 ortholog_one2one 1 retrogene
retro_ocun_725,
Otolemur garnettii ENSOGAG00000030456 ortholog_one2many 1 retrogene
retro_ogar_159,
Pan troglodytes ENSPTRG00000001295 ortholog_one2one 2 retrogenes
retro_ptro_2765, retro_ptro_2996,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3347 78.85 77.53
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Download FASTA sequences of all ENSPPYG00000000857 retrocopies