Parental gene: | MRPL9, ENSPTRG00000001295 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:129957266..129961877(-) |
>ENSPTRG00000001295
ATGGCGGCGCCCGTTGTCACGGCCCCGGGCAGAGCTCTGCTGCGGGCGGGCGCTGGACGGCTGCTTCGGGGAGGCGTCCA
GGAGCTACTGCGGCCGCGACATGAAGGGAACGCCCCTGACCTGGCCTGCAACTTCAGCCTTTCTCAAAATCGGGGCACGG
TCATCGTGGAGCGCTGGTGGAAGGTACCGCTGGCCGGGGAGGGCCGGAAGCCGCGCCTGCACCGGCGACATCGCGTCTAT
AAGCTGGTGGAGGACACGAAGCATCGGCCCAAAGAAAACCTGGAGCTCATCCTGACGCAGTCGGTGGAGAATGTTGGAGT
CCGGGGTGACCTGGTCTCAGTGAAGAAATCTTTAGGCCGGAATCGACTCCTTCCTCAGGGACTGGCTGTATATGCATCCC
CTGAAAACAAGAAGCTGTTTGAAGAGGAGAAATTGCTGAGACAAGAAGGAAAATTAGAGAAGATCCAGACCAAGGCAGGT
GAGGCGACAGTGAAATTTCTAAAAAGCTGTCGCCTGGAGGTAGGGATGAAGAACAATGTCAAATGGGAGCTGAACACTGA
AATAGTTGCCCGCCACTTCTTCAAGAATCTTGGTGTTGTGGTTGCCCCACATACATTAAAGTTACCAGAAGAGCCTATCA
CACGGTGGGGCGAGTATTGGTGTGAGGTGACGGTAAATGGGCTTGATACTGTGAGAGTGCCTATGTCTGTCGTGAACTTT
GAGAAGCCCAAGACCAAAAGATATAAGTACTGGTTAGCCCAGCAAGCTGCCAAGGCCATGGCCCCCACCAGCCCCCAGAT
CTAA
ATGGCGGCGCCCGTTGTCACGGCCCCGGGCAGAGCTCTGCTGCGGGCGGGCGCTGGACGGCTGCTTCGGGGAGGCGTCCA
GGAGCTACTGCGGCCGCGACATGAAGGGAACGCCCCTGACCTGGCCTGCAACTTCAGCCTTTCTCAAAATCGGGGCACGG
TCATCGTGGAGCGCTGGTGGAAGGTACCGCTGGCCGGGGAGGGCCGGAAGCCGCGCCTGCACCGGCGACATCGCGTCTAT
AAGCTGGTGGAGGACACGAAGCATCGGCCCAAAGAAAACCTGGAGCTCATCCTGACGCAGTCGGTGGAGAATGTTGGAGT
CCGGGGTGACCTGGTCTCAGTGAAGAAATCTTTAGGCCGGAATCGACTCCTTCCTCAGGGACTGGCTGTATATGCATCCC
CTGAAAACAAGAAGCTGTTTGAAGAGGAGAAATTGCTGAGACAAGAAGGAAAATTAGAGAAGATCCAGACCAAGGCAGGT
GAGGCGACAGTGAAATTTCTAAAAAGCTGTCGCCTGGAGGTAGGGATGAAGAACAATGTCAAATGGGAGCTGAACACTGA
AATAGTTGCCCGCCACTTCTTCAAGAATCTTGGTGTTGTGGTTGCCCCACATACATTAAAGTTACCAGAAGAGCCTATCA
CACGGTGGGGCGAGTATTGGTGTGAGGTGACGGTAAATGGGCTTGATACTGTGAGAGTGCCTATGTCTGTCGTGAACTTT
GAGAAGCCCAAGACCAAAAGATATAAGTACTGGTTAGCCCAGCAAGCTGCCAAGGCCATGGCCCCCACCAGCCCCCAGAT
CTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 27 .08 RPM |
| SRP007412_cerebellum | 37 .10 RPM |
| SRP007412_heart | 20 .05 RPM |
| SRP007412_kidney | 27 .75 RPM |
| SRP007412_liver | 29 .20 RPM |
| SRP007412_testis | 28 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000258 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011403 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000143436 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001902 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000006271 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010275 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001383 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000030456 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000857 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2765 | 76.81 | 77.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2996 | 72.17 | 78.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000001295 retrocopies