Parental gene:

HAX1, ENSG00000143575

Aliases:HAX1, HCLSBP1, HS1BP1, SCN3
Description:HCLS1 associated protein X-1 [Source:HGNC Symbol;Acc:16915]
Organism:Human (Homo sapiens)
Coordinates:1:154244986..154248351(+)


>ENSG00000143575
ATGAGCCTCTTTGATCTCTTCCGGGGCTTTTTCGGCTTTCCTGGACCTCGGAGCCACAGAGATCCCTTTTTTGGAGGGAT
GACTCGAGATGAAGATGATGATGAGGAAGAAGAAGAAGAAGGGGGCTCATGGGGCCGTGGGAACCCAAGGTTCCATAGTC
CTCAGCACCCCCCTGAGGAATTTGGCTTCGGCTTCAGCTTCAGCCCAGGAGGAGGGATACGTTTCCACGATAACTTCGGC
TTTGATGACCTAGTACGAGATTTCAATAGCATCTTCAGCGATATGGGGGCCTGGACCTTGCCTTCCCATCCTCCTGAACT
TCCAGGTCCTGAGTCAGAGACACCTGGTGAGAGACTACGGGAGGGACAGACACTTCGGGACTCAATGCTTAAGTATCCAG
ATAGTCACCAGCCCAGGATCTTTGGGGGGGTCTTGGAGAGTGATGCAAGAAGTGAATCCCCCCAACCAGCACCAGACTGG
GGCTCCCAGAGGCCATTTCATAGGTTTGATGATGTATGGCCTATGGACCCCCATCCTAGAACCAGAGAGGACAATGATCT
TGATTCCCAGGTTTCCCAGGAGGGTCTTGGCCCGGTTCTACAGCCCCAGCCCAAATCCTATTTCAAGAGCATCTCTGTGA
CCAAGATCACTAAACCAGATGGGATAGTGGAGGAGCGCCGGACTGTGGTGGACAGTGAGGGCCGGACAGAGACTACAGTA
ACCCGACACGAAGCAGATAGCAGTCCTAGGGGTGATCCAGAATCACCAAGACCTCCAGCCCTGGATGATGCCTTTTCCAT
CCTGGACTTATTCCTGGGACGTTGGTTCCGGTCCCGGTAG

Library Parental gene expression (RPM)
bodymap2_liver 50 .38 RPM
bodymap2_lung 39 .01 RPM
bodymap2_breast 47 .76 RPM
bodymap2_adipose 39 .00 RPM
bodymap2_adrenal 47 .94 RPM
bodymap2_skeletal_muscle 74 .68 RPM
bodymap2_thyroid 59 .90 RPM
bodymap2_prostate 72 .40 RPM
bodymap2_colon 52 .73 RPM
bodymap2_testis 73 .04 RPM
bodymap2_brain 33 .78 RPM
bodymap2_heart 70 .04 RPM
bodymap2_white_blood_cells 41 .82 RPM
bodymap2_lymph_node 50 .84 RPM
bodymap2_ovary 56 .62 RPM
bodymap2_kidney 54 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009660 ortholog_one2one 1 retrogene
retro_cjac_1888,
Dasypus novemcinctus ENSDNOG00000016727 ortholog_one2one 1 retrogene
retro_dnov_1537,
Dipodomys ordii ENSDORG00000012587 ortholog_one2one 1 retrogene
retro_dord_769,
Microcebus murinus ENSMICG00000010414 ortholog_one2one 2 retrogenes
retro_mmur_1118, retro_mmur_1284,
Monodelphis domestica ENSMODG00000017215 ortholog_one2one 1 retrogene
retro_mdom_433,
Mus musculus ENSMUSG00000027944 ortholog_one2one 3 retrogenes
retro_mmus_1306, retro_mmus_2000, retro_mmus_353,
Nomascus leucogenys ENSNLEG00000011290 ortholog_one2one 1 retrogene
retro_nleu_2286,
Pan troglodytes ENSPTRG00000001380 ortholog_one2one 1 retrogene
retro_ptro_3275,
Rattus norvegicus ENSRNOG00000045647 ortholog_one2many 1 retrogene
retro_rnor_736,
Tupaia belangeri ENSTBEG00000014445 ortholog_one2one 1 retrogene
retro_tbel_930,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4912 89.24 79.21
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Download FASTA sequences of all ENSG00000143575 retrocopies