Parental gene:

UCHL1, ENSG00000154277

Aliases:UCHL1, HEL-117, NDGOA, PARK5, PGP 9.5, PGP9.5, PGP95, Uch-L1
Description:ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:HGNC Symbol;Acc:12513]
Organism:Human (Homo sapiens)
Coordinates:4:41258429..41270472(+)


>ENSG00000154277
ATGCAGCTCAAGCCGATGGAGATCAACCCCGAGATGCTGAACAAAGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCG
CTTCGTGGACGTGCTGGGGCTGGAAGAGGAGTCTCTGGGCTCGGTGCCAGCGCCTGCCTGCGCGCTGCTGCTGCTGTTTC
CCCTCACGGCCCAGCATGAGAACTTCAGGAAAAAGCAGATTGAAGAGCTGAAGGGACAAGAAGTTAGTCCTAAAGTGTAC
TTCATGAAGCAGACCATTGGGAATTCCTGTGGCACAATCGGACTTATTCACGCAGTGGCCAATAATCAAGACAAACTGGG
ATTTGAGGATGGATCAGTTCTGAAACAGTTTCTTTCTGAAACAGAGAAAATGTCCCCTGAAGACAGAGCAAAATGCTTTG
AAAAGAATGAGGCCATACAGGCAGCCCATGATGCCGTGGCACAGGAAGGCCAATGTCGGGTAGATGACAAGGTGAATTTC
CATTTTATTCTGTTTAACAACGTGGATGGCCACCTCTATGAACTTGATGGACGAATGCCTTTTCCGGTGAACCATGGCGC
CAGTTCAGAGGACACCCTGCTGAAGGACGCTGCCAAGGTCTGCAGAGAATTCACCGAGCGTGAGCAAGGAGAAGTCCGCT
TCTCTGCCGTGGCTCTCTGCAAGGCAGCCTAA

Library Parental gene expression (RPM)
bodymap2_adipose 10 .85 RPM
bodymap2_adrenal 5 .06 RPM
bodymap2_brain 469 .22 RPM
bodymap2_breast 83 .23 RPM
bodymap2_colon 43 .35 RPM
bodymap2_heart 5 .02 RPM
bodymap2_kidney 67 .00 RPM
bodymap2_liver 0 .34 RPM
bodymap2_lung 7 .40 RPM
bodymap2_lymph_node 15 .22 RPM
bodymap2_ovary 31 .21 RPM
bodymap2_prostate 40 .60 RPM
bodymap2_skeletal_muscle 3 .89 RPM
bodymap2_testis 23 .11 RPM
bodymap2_thyroid 17 .70 RPM
bodymap2_white_blood_cells 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019346 ortholog_one2many 1 retrogene
retro_cjac_365,
Erinaceus europaeus ENSEEUG00000002185 ortholog_one2one 3 retrogenes
retro_eeur_150, retro_eeur_573, retro_eeur_598,
Echinops telfairi ENSETEG00000012347 ortholog_one2many 1 retrogene
retro_etel_44,
Gorilla gorilla ENSGGOG00000008809 ortholog_one2one 1 retrogene
retro_ggor_648,
Macropus eugenii ENSMEUG00000013774 ortholog_one2many 1 retrogene
retro_meug_8,
Myotis lucifugus ENSMLUG00000010138 ortholog_one2one 2 retrogenes
retro_mluc_1216, retro_mluc_2113,
Nomascus leucogenys ENSNLEG00000017176 ortholog_one2one 2 retrogenes
retro_nleu_2582, retro_nleu_2583,
Oryctolagus cuniculus ENSOCUG00000001353 possible_ortholog 1 retrogene
retro_ocun_309,
Pan troglodytes ENSPTRG00000016009 ortholog_one2one 2 retrogenes
retro_ptro_3028, retro_ptro_3029,
Tarsius syrichta ENSTSYG00000008305 ortholog_one2one 1 retrogene
retro_tsyr_1191,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_781 62.09 78.48
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2. retro_hsap_782 60.59 73.09
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Download FASTA sequences of all ENSG00000154277 retrocopies