Parental gene:

HNRNPK, ENSG00000165119

Aliases:HNRNPK, CSBP, HNRPK, TUNP
Description:heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:5044]
Organism:Human (Homo sapiens)
Coordinates:9:86582997..86595569(-)


>ENSG00000165119
ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCCATCAAAGGACGTGCACAGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGTCGCGGACGCCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTC
CCGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTC
ATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATGAGCCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA

Library Parental gene expression (RPM)
bodymap2_adipose 632 .24 RPM
bodymap2_adrenal 629 .54 RPM
bodymap2_brain 489 .31 RPM
bodymap2_breast 490 .86 RPM
bodymap2_colon 535 .89 RPM
bodymap2_heart 269 .31 RPM
bodymap2_kidney 464 .01 RPM
bodymap2_liver 257 .46 RPM
bodymap2_lung 592 .28 RPM
bodymap2_lymph_node 446 .35 RPM
bodymap2_ovary 648 .99 RPM
bodymap2_prostate 490 .85 RPM
bodymap2_skeletal_muscle 283 .35 RPM
bodymap2_testis 574 .25 RPM
bodymap2_thyroid 702 .41 RPM
bodymap2_white_blood_cells 806 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021131 ortholog_one2one 2 retrogenes
retro_btau_468, retro_btau_605,
Homo sapiens ENSG00000197111 other_paralog 2 retrogenes
retro_hsap_4077, retro_hsap_83,
Microcebus murinus ENSMICG00000015780 ortholog_one2one 3 retrogenes
retro_mmur_1562, retro_mmur_235, retro_mmur_448,
Myotis lucifugus ENSMLUG00000005871 ortholog_one2one 2 retrogenes
retro_mluc_128, retro_mluc_561,
Macaca mulatta ENSMMUG00000018871 possible_ortholog 1 retrogene
retro_mmul_2111,
Monodelphis domestica ENSMODG00000008402 possible_ortholog 1 retrogene
retro_mdom_1666,
Mus musculus ENSMUSG00000021546 ortholog_one2one 2 retrogenes
retro_mmus_1131, retro_mmus_2137,
Otolemur garnettii ENSOGAG00000007478 possible_ortholog 3 retrogenes
retro_ogar_2635, retro_ogar_2966, retro_ogar_3086,
Pongo abelii ENSPPYG00000019327 ortholog_one2one 3 retrogenes
retro_pabe_2105, retro_pabe_2106, retro_pabe_42,
Sarcophilus harrisii ENSSHAG00000017109 possible_ortholog 1 retrogene
retro_shar_820,
Tupaia belangeri ENSTBEG00000001289 ortholog_one2one 1 retrogene
retro_tbel_2491,
Tursiops truncatus ENSTTRG00000004906 ortholog_one2many 1 retrogene
retro_ttru_1622,
Tursiops truncatus ENSTTRG00000016693 ortholog_one2many 7 retrogenes
retro_ttru_1144, retro_ttru_180, retro_ttru_1922, retro_ttru_444, retro_ttru_813, retro_ttru_930, retro_ttru_937,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2323 86.91 100.00
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2. retro_hsap_2674 93.10 99.78
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3. retro_hsap_3385 86.85 100.00
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Download FASTA sequences of all ENSG00000165119 retrocopies