Parental gene:

NUDT5, ENSG00000165609

Aliases:NUDT5, YSA1, YSA1H, YSAH1, hYSAH1
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:HGNC Symbol;Acc:8052]
Organism:Human (Homo sapiens)
Coordinates:10:12207323..12238143(-)


>ENSG00000165609
ATGGAGAGCCAAGAACCAACGGAATCTTCTCAGAATGGCAAACAGTATATCATTTCAGAGGAGTTAATTTCAGAAGGAAA
ATGGGTCAAGCTTGAAAAAACAACGTACATGGATCCTACTGGTAAAACTAGAACTTGGGAATCAGTGAAACGTACAACCA
GGAAAGAGCAGACTGCGGATGGTGTCGCGGTCATCCCCGTGCTGCAGAGAACACTTCACTATGAGTGTATCGTTCTGGTG
AAACAGTTCCGACCACCAATGGGGGGCTACTGCATAGAGTTCCCTGCAGGTCTCATAGATGATGGTGAAACCCCAGAAGC
AGCTGCTCTCCGGGAGCTTGAAGAAGAAACTGGCTACAAAGGGGACATTGCCGAATGTTCTCCAGCGGTCTGTATGGACC
CAGGCTTGTCAAACTGTACTATACACATCGTGACAGTCACCATTAACGGAGATGATGCCGAAAACGCAAGGCCGAAGCCA
AAGCCAGGGGATGGAGAGTTTGTGGAAGTCATTTCTTTACCCAAGAATGACCTGCTGCAGAGACTTGATGCTCTGGTAGC
TGAAGAACATCTCACAGTGGACGCCAGGGTCTATTCCTACGCTCTAGCACTGAAACATGCAAATGCAAAGCCATTTGAAG
TGCCCTTCTTGAAATTTTAA

Library Parental gene expression (RPM)
bodymap2_liver 73 .70 RPM
bodymap2_lung 25 .23 RPM
bodymap2_breast 38 .17 RPM
bodymap2_adipose 33 .69 RPM
bodymap2_adrenal 37 .83 RPM
bodymap2_skeletal_muscle 3 .66 RPM
bodymap2_thyroid 32 .75 RPM
bodymap2_prostate 28 .68 RPM
bodymap2_colon 24 .46 RPM
bodymap2_testis 29 .51 RPM
bodymap2_brain 20 .16 RPM
bodymap2_heart 7 .92 RPM
bodymap2_white_blood_cells 46 .11 RPM
bodymap2_lymph_node 45 .34 RPM
bodymap2_ovary 36 .24 RPM
bodymap2_kidney 54 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019509 ortholog_one2one 2 retrogenes
retro_btau_1326, retro_btau_1438,
Canis familiaris ENSCAFG00000004794 ortholog_one2one 2 retrogenes
retro_cfam_435, retro_cfam_612,
Equus caballus ENSECAG00000023658 ortholog_one2one 1 retrogene
retro_ecab_647,
Echinops telfairi ENSETEG00000006403 ortholog_one2many 1 retrogene
retro_etel_946,
Felis catus ENSFCAG00000025093 ortholog_one2one 1 retrogene
retro_fcat_350,
Gorilla gorilla ENSGGOG00000006325 ortholog_one2one 1 retrogene
retro_ggor_2415,
Loxodonta africana ENSLAFG00000012052 ortholog_one2one 1 retrogene
retro_lafr_226,
Myotis lucifugus ENSMLUG00000010453 ortholog_one2one 2 retrogenes
retro_mluc_1263, retro_mluc_2073,
Macaca mulatta ENSMMUG00000017141 ortholog_one2one 1 retrogene
retro_mmul_1828,
Nomascus leucogenys ENSNLEG00000012298 ortholog_one2one 1 retrogene
retro_nleu_2838,
Oryctolagus cuniculus ENSOCUG00000009308 ortholog_one2one 1 retrogene
retro_ocun_862,
Otolemur garnettii ENSOGAG00000005816 ortholog_one2one 2 retrogenes
retro_ogar_2071, retro_ogar_2988,
Pongo abelii ENSPPYG00000002091 ortholog_one2one 2 retrogenes
retro_pabe_2949, retro_pabe_3040,
Pan troglodytes ENSPTRG00000002294 ortholog_one2one 1 retrogene
retro_ptro_2427,
Rattus norvegicus ENSRNOG00000017741 ortholog_one2many 1 retrogene
retro_rnor_1672,
Sus scrofa ENSSSCG00000011113 ortholog_one2many 1 retrogene
retro_sscr_143,
Tursiops truncatus ENSTTRG00000007394 ortholog_one2one 2 retrogenes
retro_ttru_209, retro_ttru_495,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3580 86.89 55.71
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Download FASTA sequences of all ENSG00000165609 retrocopies