Parental gene: | LDHAL6A, ENSG00000166800 |
| Aliases: | LDHAL6A, LDH6A |
| Description: | lactate dehydrogenase A-like 6A [Source:HGNC Symbol;Acc:28335] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:18477370..18501147(+) |
>ENSG00000166800
ATGGCAACTATCAAGAGTGAACTTATTAAGAATTTCGCGGAAGAGGAGGCCATTCATCACAATAAGATCTCCATTGTAGG
AACTGGATCGGTTGGTGTGGCTTGTGCTATCAGCATCTTATTAAAAGGTTTGAGTGATGAACTTGTCCTTGTGGATGTTG
ATGAAGGCAAACTGAAGGGTGAGACAATGGATCTTCAACATGGCAGCCCTTTTATGAAAATGCCAAATATTGTCTCCAGC
AAAGATTACCTGGTCACTGCAAACTCCAATCTAGTGATTATCACAGCAGGTGCACGCCAGAAAAAAGGAGAAACACGCCT
TGATTTAGTCCAGCGAAATGTATCCATCTTTAAATTAATGATTCCCAATATTACCCAGTACAGTCCTCACTGCAAACTGC
TTATTGTTACTAATCCAGTGGATATCTTAACTTATGTAGCCTGGAAGTTGAGTGGATTTCCCAAAAACCGTGTTATTGGA
AGTGGTTGTAATCTGGACTCTGCTCGTTTTCGTTACTTTATTGGGCAAAGGCTTGGCATCCACTCTGAAAGCTGTCATGG
GCTGATCCTTGGAGAGCATGGCGACTCAAGTGTTCCTGTGTGGAGTGGTGTGAACATTGCTGGCGTCCCTCTGAAGGATC
TGAACCCAGATATAGGAACTGATAAAGATCCTGAGCAGTGGGAAAATGTCCACAAAAAAGTGATTTCCAGTGGCTATGAG
ATGGTCAAAATGAAAGGTTATACTTCTTGGGGCATTAGCCTATCTGTAGCTGATTTAACAGAAAGTATTTTGAAGAATCT
TAGGAGAGTGCATCCAGTTTCTACCCTAAGTAAGGGCCTCTATGGAATAAATGAAGACATATTCCTTAGTGTCCCATGTA
TCCTGGGAGAGAATGGTATCACAGACCTCATAAAAGTAAAACTGACTCTTGAAGAGGAGGCCTGCTTGCAAAAGAGTGCA
GAAACACTTTGGGAAATTCAGAAGGAGCTCAAGCTTTAA
ATGGCAACTATCAAGAGTGAACTTATTAAGAATTTCGCGGAAGAGGAGGCCATTCATCACAATAAGATCTCCATTGTAGG
AACTGGATCGGTTGGTGTGGCTTGTGCTATCAGCATCTTATTAAAAGGTTTGAGTGATGAACTTGTCCTTGTGGATGTTG
ATGAAGGCAAACTGAAGGGTGAGACAATGGATCTTCAACATGGCAGCCCTTTTATGAAAATGCCAAATATTGTCTCCAGC
AAAGATTACCTGGTCACTGCAAACTCCAATCTAGTGATTATCACAGCAGGTGCACGCCAGAAAAAAGGAGAAACACGCCT
TGATTTAGTCCAGCGAAATGTATCCATCTTTAAATTAATGATTCCCAATATTACCCAGTACAGTCCTCACTGCAAACTGC
TTATTGTTACTAATCCAGTGGATATCTTAACTTATGTAGCCTGGAAGTTGAGTGGATTTCCCAAAAACCGTGTTATTGGA
AGTGGTTGTAATCTGGACTCTGCTCGTTTTCGTTACTTTATTGGGCAAAGGCTTGGCATCCACTCTGAAAGCTGTCATGG
GCTGATCCTTGGAGAGCATGGCGACTCAAGTGTTCCTGTGTGGAGTGGTGTGAACATTGCTGGCGTCCCTCTGAAGGATC
TGAACCCAGATATAGGAACTGATAAAGATCCTGAGCAGTGGGAAAATGTCCACAAAAAAGTGATTTCCAGTGGCTATGAG
ATGGTCAAAATGAAAGGTTATACTTCTTGGGGCATTAGCCTATCTGTAGCTGATTTAACAGAAAGTATTTTGAAGAATCT
TAGGAGAGTGCATCCAGTTTCTACCCTAAGTAAGGGCCTCTATGGAATAAATGAAGACATATTCCTTAGTGTCCCATGTA
TCCTGGGAGAGAATGGTATCACAGACCTCATAAAAGTAAAACTGACTCTTGAAGAGGAGGCCTGCTTGCAAAAGAGTGCA
GAAACACTTTGGGAAATTCAGAAGGAGCTCAAGCTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 0 .00 RPM |
| bodymap2_lung | 0 .00 RPM |
| bodymap2_breast | 0 .16 RPM |
| bodymap2_adipose | 0 .24 RPM |
| bodymap2_adrenal | 0 .84 RPM |
| bodymap2_skeletal_muscle | 0 .00 RPM |
| bodymap2_thyroid | 0 .79 RPM |
| bodymap2_prostate | 0 .00 RPM |
| bodymap2_colon | 0 .04 RPM |
| bodymap2_testis | 7 .33 RPM |
| bodymap2_brain | 0 .59 RPM |
| bodymap2_heart | 0 .06 RPM |
| bodymap2_white_blood_cells | 0 .45 RPM |
| bodymap2_lymph_node | 0 .27 RPM |
| bodymap2_ovary | 0 .71 RPM |
| bodymap2_kidney | 0 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007067 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000111716 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000134333 | within_species_paralog | 5 retrogenes | |
| Macaca mulatta | ENSMMUG00000014614 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017780 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009261 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003435 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000003423 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000008062 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_42 | 82.23 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_905 | 65.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000166800 retrocopies