Parental gene:

PTEN, ENSG00000171862

Aliases:None
Description:phosphatase and tensin homolog [Source:HGNC Symbol;Acc:9588]
Organism:Human (Homo sapiens)
Coordinates:10:89622869..89731687(+)


>ENSG00000171862
ATGACAGCCATCATCAAAGAGATCGTTAGCAGAAACAAAAGGAGATATCAAGAGGATGGATTCGACTTAGACTTGACCTA
TATTTATCCAAACATTATTGCTATGGGATTTCCTGCAGAAAGACTTGAAGGCGTATACAGGAACAATATTGATGATGTAG
TAAGGTTTTTGGATTCAAAGCATAAAAACCATTACAAGATATACAATCTTTGTGCTGAAAGACATTATGACACCGCCAAA
TTTAATTGCAGAGTTGCACAATATCCTTTTGAAGACCATAACCCACCACAGCTAGAACTTATCAAACCCTTTTGTGAAGA
TCTTGACCAATGGCTAAGTGAAGATGACAATCATGTTGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAA
TGATATGTGCATATTTATTACATCGGGGCAAATTTTTAAAGGCACAAGAGGCCCTAGATTTCTATGGGGAAGTAAGGACC
AGAGACAAAAAGGGAGTAACTATTCCCAGTCAGAGGCGCTATGTGTATTATTATAGCTACCTGTTAAAGAATCATCTGGA
TTATAGACCAGTGGCACTGTTGTTTCACAAGATGATGTTTGAAACTATTCCAATGTTCAGTGGCGGAACTTGCAATCCTC
AGTTTGTGGTCTGCCAGCTAAAGGTGAAGATATATTCCTCCAATTCAGGACCCACACGACGGGAAGACAAGTTCATGTAC
TTTGAGTTCCCTCAGCCGTTACCTGTGTGTGGTGATATCAAAGTAGAGTTCTTCCACAAACAGAACAAGATGCTAAAAAA
GGACAAAATGTTTCACTTTTGGGTAAATACATTCTTCATACCAGGACCAGAGGAAACCTCAGAAAAAGTAGAAAATGGAA
GTCTATGTGATCAAGAAATCGATAGCATTTGCAGTATAGAGCGTGCAGATAATGACAAGGAATATCTAGTACTTACTTTA
ACAAAAAATGATCTTGACAAAGCAAATAAAGACAAAGCCAACCGATACTTTTCTCCAAATTTTAAGGTGAAGCTGTACTT
CACAAAAACAGTAGAGGAGCCGTCAAATCCAGAGGCTAGCAGTTCAACTTCTGTAACACCAGATGTTAGTGACAATGAAC
CTGATCATTATAGATATTCTGACACCACTGACTCTGATCCAGAGAATGAACCTTTTGATGAAGATCAGCATACACAAATT
ACAAAAGTCTGA

Library Parental gene expression (RPM)
bodymap2_liver 76 .59 RPM
bodymap2_lung 130 .27 RPM
bodymap2_breast 224 .15 RPM
bodymap2_adipose 263 .62 RPM
bodymap2_adrenal 143 .45 RPM
bodymap2_skeletal_muscle 93 .43 RPM
bodymap2_thyroid 182 .19 RPM
bodymap2_prostate 178 .95 RPM
bodymap2_colon 233 .87 RPM
bodymap2_testis 202 .41 RPM
bodymap2_brain 118 .84 RPM
bodymap2_heart 109 .18 RPM
bodymap2_white_blood_cells 382 .02 RPM
bodymap2_lymph_node 175 .99 RPM
bodymap2_ovary 226 .18 RPM
bodymap2_kidney 182 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009252 ortholog_one2one 1 retrogene
retro_chof_578,
Gorilla gorilla ENSGGOG00000000893 ortholog_one2one 1 retrogene
retro_ggor_2846,
Nomascus leucogenys ENSNLEG00000012141 ortholog_one2one 1 retrogene
retro_nleu_1280,
Pongo abelii ENSPPYG00000002448 ortholog_one2one 1 retrogene
retro_pabe_3393,
Sarcophilus harrisii ENSSHAG00000003709 ortholog_one2one 1 retrogene
retro_shar_828,
Sus scrofa ENSSSCG00000010440 ortholog_one2one 2 retrogenes
retro_sscr_236, retro_sscr_237,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4245 97.51 99.75
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Download FASTA sequences of all ENSG00000171862 retrocopies