Parental gene:

TUFM, ENSG00000178952

Aliases:TUFM, COXPD4, EF-TuMT, EFTU, P43
Description:Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:12420]
Organism:Human (Homo sapiens)
Coordinates:16:28853731..28857729(-)


>ENSG00000178952
ATGACCACAATGGCGGCCGCCACCCTGCTGCGCGCGACGCCCCACTTCAGCGGTCTCGCCGCCGGCCGGACCTTCCTGCT
GCAGGGTCTGTTGCGGCTGCTGAAAGCCCCGGCATTGCCTCTCTTGTGCCGCGGCCTGGCCGTGGAGGCCAAGAAGACTT
ACGTGCGCGACAAGCCACATGTGAATGTGGGTACCATCGGCCATGTGGACCACGGGAAGACCACGCTGACTGCAGCCATC
ACGAAGATTCTAGCTGAGGGAGGTGGGGCTAAGTTCAAGAAGTACGAGGAGATTGACAATGCCCCGGAGGAGCGAGCTCG
GGGTATCACCATCAATGCGGCTCATGTGGAGTATAGCACTGCCGCCCGCCACTACGCCCACACAGACTGCCCGGGTCATG
CAGATTATGTTAAGAATATGATCACAGGCACTGCACCCCTCGACGGCTGCATCCTGGTGGTAGCAGCCAATGACGGCCCC
ATGCCCCAGACCCGAGAGCACTTATTACTGGCCAGACAGATTGGGGTGGAGCATGTGGTGGTGTATGTGAACAAGGCTGA
CGCTGTCCAGGACTCTGAGATGGTGGAACTGGTGGAACTGGAGATCCGGGAGCTGCTCACCGAGTTTGGCTATAAAGGGG
AGGAGACCCCAGTCATCGTAGGCTCTGCTCTCTGTGCCCTTGAGGGTCGGGACCCTGAGTTAGGCCTGAAGTCTGTGCAG
AAGCTACTGGATGCTGTGGACACTTACATCCCAGTGCCCGCCCGGGACCTGGAGAAGCCTTTCCTGCTGCCTGTGGAGGC
GGTGTACTCCGTCCCTGGCCGTGGCACCGTGGTGACAGGTACACTAGAGCGTGGCATTTTAAAGAAGGGAGACGAGTGTG
AGCTCCTAGGACATAGCAAGAACATCCGCACTGTGGTGACAGGCATTGAGATGTTCCACAAGAGCCTGGAGAGGGCCGAG
GCCGGAGATAACCTCGGGGCCCTGGTCCGAGGCTTGAAGCGGGAGGACTTGCGGCGGGGCCTGGTCATGGTCAAGCCAGG
TTCCATCAAGCCCCACCAGAAGGTGGAGGCCCAGGTTTACATCCTCAGCAAGGAGGAAGGTGGCCGCCACAAGCCCTTTG
TGTCCCACTTCATGCCTGTCATGTTCTCCCTGACTTGGGACATGGCCTGTCGGATTATCCTGCCCCCAGAGAAGGAGCTT
GCCATGCCCGGGGAGGACCTGAAGTTCAACCTAATCTTGCGGCAGCCAATGATCTTAGAGAAAGGCCAGCGTTTCACCCT
GCGAGATGGCAACCGGACTATTGGCACCGGTCTAGTCACCAACACGCTGGCCATGACTGAGGAGGAGAAGAATATCAAAT
GGGGTTGA

Library Parental gene expression (RPM)
bodymap2_adipose 83 .55 RPM
bodymap2_adrenal 103 .39 RPM
bodymap2_brain 60 .15 RPM
bodymap2_breast 83 .15 RPM
bodymap2_colon 77 .96 RPM
bodymap2_heart 99 .45 RPM
bodymap2_kidney 134 .92 RPM
bodymap2_liver 115 .31 RPM
bodymap2_lung 82 .98 RPM
bodymap2_lymph_node 93 .27 RPM
bodymap2_ovary 86 .21 RPM
bodymap2_prostate 85 .70 RPM
bodymap2_skeletal_muscle 130 .04 RPM
bodymap2_testis 122 .47 RPM
bodymap2_thyroid 110 .54 RPM
bodymap2_white_blood_cells 85 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000016474 ortholog_one2one 1 retrogene
retro_dord_278,
Macropus eugenii ENSMEUG00000011131 ortholog_one2one 1 retrogene
retro_meug_1783,
Monodelphis domestica ENSMODG00000015564 ortholog_one2one 1 retrogene
retro_mdom_384,
Mus musculus ENSMUSG00000073838 ortholog_one2many 1 retrogene
retro_mmus_10,
Ornithorhynchus anatinus ENSOANG00000013114 ortholog_one2one 1 retrogene
retro_oana_36,
Oryctolagus cuniculus ENSOCUG00000002683 ortholog_one2one 1 retrogene
retro_ocun_333,
Pan troglodytes ENSPTRG00000007939 ortholog_one2one 1 retrogene
retro_ptro_1174,
Rattus norvegicus ENSRNOG00000018604 ortholog_one2one 1 retrogene
retro_rnor_1134,
Vicugna pacos ENSVPAG00000009541 ortholog_one2one 1 retrogene
retro_vpac_346,
Drosophila melanogaster FBgn0033184 ortholog_one2many 1 retrogene
retro_dmel_52,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1816 84.13 72.75
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Download FASTA sequences of all ENSG00000178952 retrocopies