Parental gene: | RCC2, ENSG00000179051 |
| Aliases: | RCC2, TD-60 |
| Description: | regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:30297] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:17733255..17766220(-) |
>ENSG00000179051
ATGCCCAGGAAGAAGGCGGCGGCGGCGGCCTGGGAGGAGCCGAGCTCGGGCAACGGCACTGCCCGCGCCGGGCCCAGGAA
ACGCGGCGGCCCGGCGGGCAGGAAGCGCGAGCGGCCCGAGCGCTGCAGTAGCAGCAGCGGCGGCGGCAGCAGCGGCGACG
AGGACGGCCTGGAGCTCGACGGGGCCCCCGGCGGGGGCAAGCGCGCGGCGCGGCCGGCGACAGCAGGCAAGGCGGGCGGC
GCGGCCGTGGTCATCACCGAACCCGAGCACACCAAGGAGCGCGTCAAACTTGAAGGGTCAAAGTGCAAAGGGCAGCTTTT
GATTTTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGTGCCTAAACAGCAAGCTGCTTACCGCAATCTCGGTC
AGAATTTGTGGGGGCCCCACAGATATGGGTGCCTGGCGGGGGTCCGGGTGCGGACAGTGGTCTCGGGCTCGTGTGCTGCA
CACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGTCGAAATGAGAAGGGGCAGCTGGGACATGGTGACAC
CAAGAGAGTAGAAGCCCCTAGACTCATCGAGGGTCTTAGCCACGAAGTGATTGTGTCTGCAGCATGTGGGCGGAACCACA
CCTTGGCCTTGACGGAAACGGGCTCCGTGTTTGCGTTTGGGGAAAACAAGATGGGGCAGCTGGGCCTTGGCAACCAGACA
GACGCTGTTCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCAATTACCAAAATGGCCTGTGGGGCTGAATTCAGTAT
GATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGAATATGGTCAGCTGGGACACAACTCAGATGGGAAGT
TCATCGCCCGGGCACAGCGGATAGAGTACGACTGTGAACTAGTTCCCCGGCGAGTGGCCATCTTCATTGAGAAGACGAAA
GATGGACAGATTCTGCCTGTACCAAACGTGGTTGTACGAGACGTGGCCTGTGGCGCTAACCACACGCTGGTCCTGGACTC
CCAGAAGCGAGTCTTCTCCTGGGGCTTTGGTGGCTATGGCCGGCTGGGCCACGCAGAGCAGAAGGATGAGATGGTCCCCC
GCCTGGTGAAGCTGTTTGACTTCCCTGGGCGTGGGGCTTCCCAGATCTATGCTGGTTACACCTGCTCCTTTGCTGTCAGT
GAAGTGGGTGGTCTGTTTTTCTGGGGGGCCACCAACACCTCCCGTGAATCTACCATGTACCCAAAAGCAGTGCAGGACCT
CTGCGGCTGGAGAATCCGGAGCCTGGCTTGTGGGAAGAGCAGCATCATTGTGGCCGCCGATGAGAGCACCATCAGCTGGG
GTCCGTCACCGACCTTTGGGGAACTGGGCTACGGGGACCACAAGCCCAAGTCTTCCACTGCAGCCCAGGAGGTAAAGACT
CTGGATGGCATTTTCTCAGAGCAGGTCGCCATGGGCTACTCACACTCCTTGGTGATAGCAAGAGATGAAAGTGAGACTGA
GAAAGAGAAGATCAAGAAACTGCCAGAATACAACCCCCGAACCCTCTGA
ATGCCCAGGAAGAAGGCGGCGGCGGCGGCCTGGGAGGAGCCGAGCTCGGGCAACGGCACTGCCCGCGCCGGGCCCAGGAA
ACGCGGCGGCCCGGCGGGCAGGAAGCGCGAGCGGCCCGAGCGCTGCAGTAGCAGCAGCGGCGGCGGCAGCAGCGGCGACG
AGGACGGCCTGGAGCTCGACGGGGCCCCCGGCGGGGGCAAGCGCGCGGCGCGGCCGGCGACAGCAGGCAAGGCGGGCGGC
GCGGCCGTGGTCATCACCGAACCCGAGCACACCAAGGAGCGCGTCAAACTTGAAGGGTCAAAGTGCAAAGGGCAGCTTTT
GATTTTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGTGCCTAAACAGCAAGCTGCTTACCGCAATCTCGGTC
AGAATTTGTGGGGGCCCCACAGATATGGGTGCCTGGCGGGGGTCCGGGTGCGGACAGTGGTCTCGGGCTCGTGTGCTGCA
CACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGTCGAAATGAGAAGGGGCAGCTGGGACATGGTGACAC
CAAGAGAGTAGAAGCCCCTAGACTCATCGAGGGTCTTAGCCACGAAGTGATTGTGTCTGCAGCATGTGGGCGGAACCACA
CCTTGGCCTTGACGGAAACGGGCTCCGTGTTTGCGTTTGGGGAAAACAAGATGGGGCAGCTGGGCCTTGGCAACCAGACA
GACGCTGTTCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCAATTACCAAAATGGCCTGTGGGGCTGAATTCAGTAT
GATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGAATATGGTCAGCTGGGACACAACTCAGATGGGAAGT
TCATCGCCCGGGCACAGCGGATAGAGTACGACTGTGAACTAGTTCCCCGGCGAGTGGCCATCTTCATTGAGAAGACGAAA
GATGGACAGATTCTGCCTGTACCAAACGTGGTTGTACGAGACGTGGCCTGTGGCGCTAACCACACGCTGGTCCTGGACTC
CCAGAAGCGAGTCTTCTCCTGGGGCTTTGGTGGCTATGGCCGGCTGGGCCACGCAGAGCAGAAGGATGAGATGGTCCCCC
GCCTGGTGAAGCTGTTTGACTTCCCTGGGCGTGGGGCTTCCCAGATCTATGCTGGTTACACCTGCTCCTTTGCTGTCAGT
GAAGTGGGTGGTCTGTTTTTCTGGGGGGCCACCAACACCTCCCGTGAATCTACCATGTACCCAAAAGCAGTGCAGGACCT
CTGCGGCTGGAGAATCCGGAGCCTGGCTTGTGGGAAGAGCAGCATCATTGTGGCCGCCGATGAGAGCACCATCAGCTGGG
GTCCGTCACCGACCTTTGGGGAACTGGGCTACGGGGACCACAAGCCCAAGTCTTCCACTGCAGCCCAGGAGGTAAAGACT
CTGGATGGCATTTTCTCAGAGCAGGTCGCCATGGGCTACTCACACTCCTTGGTGATAGCAAGAGATGAAAGTGAGACTGA
GAAAGAGAAGATCAAGAAACTGCCAGAATACAACCCCCGAACCCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 10 .50 RPM |
| bodymap2_lung | 56 .82 RPM |
| bodymap2_breast | 48 .89 RPM |
| bodymap2_adipose | 60 .11 RPM |
| bodymap2_adrenal | 85 .62 RPM |
| bodymap2_skeletal_muscle | 12 .88 RPM |
| bodymap2_thyroid | 40 .26 RPM |
| bodymap2_prostate | 45 .29 RPM |
| bodymap2_colon | 37 .09 RPM |
| bodymap2_testis | 65 .95 RPM |
| bodymap2_brain | 17 .13 RPM |
| bodymap2_heart | 13 .98 RPM |
| bodymap2_white_blood_cells | 116 .24 RPM |
| bodymap2_lymph_node | 97 .87 RPM |
| bodymap2_ovary | 76 .93 RPM |
| bodymap2_kidney | 32 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000001396 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015263 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007783 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014544 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025834 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000000247 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006327 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2677 | 63.25 | 62.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3073 | 86.78 | 66.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_3597 | 80.41 | 83.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000179051 retrocopies