Parental gene:

Rcc2, ENSRNOG00000006327

Aliases:None
Description:Protein Rcc2 [Source:UniProtKB/TrEMBL;Acc:F1LVV4]
Organism:Rat (Rattus norvegicus)
Coordinates:5:162927686..162941028(+)


>ENSRNOG00000006327
AAACTTGAAGGGTCTAAGTGCAAGGGGCAGCTTTTGATCTTTGGGGCAACCAACTGGGACTTGATTGGACGAAAGGAAGT
GCCTAAACAGCAAGCTGCTTACCGCAACCTTGGTCAGAATTTGTGGGGGCCCCATAGGTATGGGTGCCTGTCAGGAGTCC
GGGTGCGAACCGTGGTTTCGGGCTCCTGTGCTGCCCACAGCCTTCTCATCACCACAGAAGGGAAGCTCTGGAGCTGGGGT
CGGAATGAAAAGGGGCAGCTGGGCCATGGTGATACCAAGAGGGTGGAAGCCCCCAGACTCATCGAGGCTCTCAGCCATGA
GGCAATTGTGCTGGCTGCGTGTGGGCGCAACCACACCCTGGCGTTAACAGATACTGGCTCTGTCTTCGCCTTCGGAGAGA
ATAAGATGGGGCAGCTGGGCCTCGGGAACCAGACAGATGCTGTTCCAAGTCCTGCCCAGATTATGTACAATGGGCAGCCA
ATTACCAAGATGGCCTGCGGGGCAGAGTTCAGCATGCTGATGGACTGTAAAGGGAACCTCTACTCCTTCGGGTGCCCTGA
ATATGGCCAACTGGGACACAACTCAGATGGGAAGTTCATCGCCCGGGCGCAGAGGATAGAGTATGATTGTGAGCTGGTGC
CCCGGAGAGTGGCCATCTTCATCGAGAAGACCAAGGACGGGCAGATTTTGCCTGTCCCCAACGTGGTGGTTCGAGACGTA
GCCTGTGGCGCTAACCACACACTGGTCCTGGATTCACAGAAGCGAGTCTTCTCCTGGGGCTTTGGTGGCTACGGCCGGCT
GGGCCATGCCGAGCAGAAGGATGAGATGGTACCTCGCCTGGTGAAGCTCTTCGATTTCCCGGGACGTGGTGCAACCCAGA
TCTATGCCGGCTACACCTGCTCCTTTGCTGTCAGTGAAGTGGGGGGGCTGTTTTTCTGGGGGGCTACCAATACTTCTCGA
GAGTCTACCATGTACCCAAAAGCCGTGCAGGACCTCTGTGGCTGGCGGATCCGGAGCCTTGCCTGCGGGAAGAGCAGCAT
CATCGTAGCGGCCGACGAGAGTACCATCAGCTGGGGCCCATCACCAACCTTCGGGGAATTGGGATATGGGGACCACAAGC
CCAAGTCTTCTACTGCAGCTCAGGAGGTGAAGACTCTGGATGGCATCTTCTCCGAACAGGTGGCCATGGGCTATTCACAT
TCATTGGTGATAGCACGAGATGAGAGCGAGGCTGAGAAGGAGAGGCTGCAGAGGCTGCCTGAGTACACCCCACGCACGCT
CTGA

Library Parental gene expression (RPM)
SRP017611_liver 11 .36 RPM
SRP017611_kidney 24 .91 RPM
SRP017611_brain 28 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001396 ortholog_one2one 1 retrogene
retro_dnov_2692,
Homo sapiens ENSG00000179051 ortholog_one2one 3 retrogenes
retro_hsap_2677, retro_hsap_3073, retro_hsap_3597,
Gorilla gorilla ENSGGOG00000015263 ortholog_one2many 1 retrogene
retro_ggor_2112,
Nomascus leucogenys ENSNLEG00000007783 ortholog_one2one 2 retrogenes
retro_nleu_2483, retro_nleu_298,
Otolemur garnettii ENSOGAG00000014544 ortholog_one2one 1 retrogene
retro_ogar_2967,
Pongo abelii ENSPPYG00000025834 ortholog_one2one 3 retrogenes
retro_pabe_2547, retro_pabe_2957, retro_pabe_748,
Pan troglodytes ENSPTRG00000000247 ortholog_one2one 3 retrogenes
retro_ptro_1804, retro_ptro_2072, retro_ptro_2434,
Rattus norvegicus ENSRNOG00000050106 within_species_paralog 1 retrogene
retro_rnor_2886,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1378 78.30 53.86
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Download FASTA sequences of all ENSRNOG00000006327 retrocopies