Parental gene: | RCC2, ENSPPYG00000025834 |
| Aliases: | None |
| Description: | regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:30297] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:212988409..213019421(+) |
>ENSPPYG00000025834
ATGCCCAGGAAGAAGGCGGCGGCGGCGGCCTGGGAGGAGCCGAGCTCGGGCAACGGCACTGCCCGCGCCGGGCCCAGGAA
ACGCGGCGGCCCGGCGGGCAGGAAGCGCGAGCGGCCCGAGCGCTGCAGTAGCAGCAGCGGCGGCGGCAGCAGCGGCGACG
AGGACGGCCTTGAGCTCGACGGGGCCCCCGGCGGGGGCAAGCGCGCGGCGCGGCCGGCGACAGCAGGCAAGGCGGGCGGN
NNNNNNNNNNNNNNNNNNNNNNNNNGCGGCAGAAGTGATGTGAGGCGCNNNNNNNNNNCAAAGTGCAAAGGGCAGCTTTT
GATTTTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGTGCCTAAACAGCAAGCTGCTTACCGCAATCTCGGTC
AGAATTTGTGGGGGCCCCACAGATATGGGTGCCTGGCGGGGGTCCGGGTGCGGACAGTGGTCTCAGGCTCCTGTGCTGCA
CACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGTCGAAATGAGAAGGGGCAGCTGGGACATGGTGACAC
CAAGAGAGTAGAAGCCCCTAGACTCATCGAGGGTCTCAGCCACGAAGTGATTGTGTCTGCAGCATGTGGGCGGAACCACA
CCTTGGCCTTGACGGAAACGGGCTCCGTGTTTGCGTTTGGGGAAAACAAGATGGGGCAGCTGGGCCTTGGCAACCAGACA
GACGCTGTCCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCAATTACCAAAATGGCCTGTGGGGCTGAATTCAGTAT
GATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGAATATGGTCAGCTGGGACACAACTCAGATGGGAAGT
TCATCGCCCGGGCACAGCGGATAGAGTACGACTGCGAACTAGTTCCCCGGCGAGTGGCCATCTTCATTGAGAAGACGAAA
GACGGACAGATTCTGCCTGTACCAAACGTGGTTGTACGAGACGTGGCCTGTGGCGCTAATCACACGCTGGTCCTGGACTC
CCAGAAGCGAGTCTTCTCCTGGGGCTTCGGTGGCTATGGCCGGCTGGGCCACGCAGAGCAGAAGGATGAGATGGTCCCCC
GCCTGGTGAAGCTGTTTGACTTCCCTGGGCGTGGGGCTTCCCAGATCTATGCTGGTTACACCTGCTCCTTTGCCGTCAGC
GAAGTGGGTGGTCTGTTTTTCTGGGGGGCCACCAACACCTCTCGTGAATCTACCATGTACCCAAAAGCAGTGCAGGACCT
CTGCGGCTGGAGAATCCGGAGCCTGGCTTGTGGGAAGAGCAGCATCATTGTGGCCGCCGACGAGAGCACCATCAGCTGGG
GCCCATCACCGACCTTTGGGGAACTGGGCTACGGGGACCACAAGCCCAAGTCTTCCACTGCAGCCCAGGAGGTGAAGACT
CTGGATGGCATTTTCTCAGAGCAGGTCGCCATGGGCTACTCACACTCCTTGGTGATAGCAAGAGACGAAAGTGAGACTGA
GAAAGAGAAGATCAAGAAACTGCCAGAATACAACCCCCGAACCCTC
ATGCCCAGGAAGAAGGCGGCGGCGGCGGCCTGGGAGGAGCCGAGCTCGGGCAACGGCACTGCCCGCGCCGGGCCCAGGAA
ACGCGGCGGCCCGGCGGGCAGGAAGCGCGAGCGGCCCGAGCGCTGCAGTAGCAGCAGCGGCGGCGGCAGCAGCGGCGACG
AGGACGGCCTTGAGCTCGACGGGGCCCCCGGCGGGGGCAAGCGCGCGGCGCGGCCGGCGACAGCAGGCAAGGCGGGCGGN
NNNNNNNNNNNNNNNNNNNNNNNNNGCGGCAGAAGTGATGTGAGGCGCNNNNNNNNNNCAAAGTGCAAAGGGCAGCTTTT
GATTTTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGTGCCTAAACAGCAAGCTGCTTACCGCAATCTCGGTC
AGAATTTGTGGGGGCCCCACAGATATGGGTGCCTGGCGGGGGTCCGGGTGCGGACAGTGGTCTCAGGCTCCTGTGCTGCA
CACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGTCGAAATGAGAAGGGGCAGCTGGGACATGGTGACAC
CAAGAGAGTAGAAGCCCCTAGACTCATCGAGGGTCTCAGCCACGAAGTGATTGTGTCTGCAGCATGTGGGCGGAACCACA
CCTTGGCCTTGACGGAAACGGGCTCCGTGTTTGCGTTTGGGGAAAACAAGATGGGGCAGCTGGGCCTTGGCAACCAGACA
GACGCTGTCCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCAATTACCAAAATGGCCTGTGGGGCTGAATTCAGTAT
GATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGAATATGGTCAGCTGGGACACAACTCAGATGGGAAGT
TCATCGCCCGGGCACAGCGGATAGAGTACGACTGCGAACTAGTTCCCCGGCGAGTGGCCATCTTCATTGAGAAGACGAAA
GACGGACAGATTCTGCCTGTACCAAACGTGGTTGTACGAGACGTGGCCTGTGGCGCTAATCACACGCTGGTCCTGGACTC
CCAGAAGCGAGTCTTCTCCTGGGGCTTCGGTGGCTATGGCCGGCTGGGCCACGCAGAGCAGAAGGATGAGATGGTCCCCC
GCCTGGTGAAGCTGTTTGACTTCCCTGGGCGTGGGGCTTCCCAGATCTATGCTGGTTACACCTGCTCCTTTGCCGTCAGC
GAAGTGGGTGGTCTGTTTTTCTGGGGGGCCACCAACACCTCTCGTGAATCTACCATGTACCCAAAAGCAGTGCAGGACCT
CTGCGGCTGGAGAATCCGGAGCCTGGCTTGTGGGAAGAGCAGCATCATTGTGGCCGCCGACGAGAGCACCATCAGCTGGG
GCCCATCACCGACCTTTGGGGAACTGGGCTACGGGGACCACAAGCCCAAGTCTTCCACTGCAGCCCAGGAGGTGAAGACT
CTGGATGGCATTTTCTCAGAGCAGGTCGCCATGGGCTACTCACACTCCTTGGTGATAGCAAGAGACGAAAGTGAGACTGA
GAAAGAGAAGATCAAGAAACTGCCAGAATACAACCCCCGAACCCTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 44 .01 RPM |
| SRP007412_cerebellum | 27 .97 RPM |
| SRP007412_heart | 8 .79 RPM |
| SRP007412_kidney | 40 .17 RPM |
| SRP007412_liver | 14 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000001396 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000179051 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015263 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007783 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014544 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000247 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006327 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_748 | 87.13 | 76.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2547 | 81.61 | 66.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2957 | 71.48 | 51.53 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000025834 retrocopies