Parental gene:

AP1S2, ENSG00000182287

Aliases:AP1S2, MGC:1902, MRX59, MRXS21, MRXS5, MRXSF, PGS, SIGMA1B
Description:adaptor-related protein complex 1, sigma 2 subunit [Source:HGNC Symbol;Acc:560]
Organism:Human (Homo sapiens)
Coordinates:X:15843928..15873054(-)


>ENSG00000182287
ATGCAGTTTATGTTGCTTTTTAGTCGTCAGGGAAAGCTTCGACTGCAAAAATGGTATGTCCCACTATCAGACAAAGAGAA
GAAAAAGATCACAAGAGAACTTGTTCAGACCGTTTTAGCACGGAAACCTAAAATGTGCAGCTTCCTTGAGTGGCGAGATC
TGAAGATTGTTTACAAAAGATATGCTAGTCTGTATTTTTGCTGTGCTATTGAGGATCAGGACAATGAACTAATTACCCTG
GAAATAATTCATCGTTATGTGGAATTACTTGACAAGTATTTCGGCAGTGTCTGTGAACTAGATATCATCTTTAATTTTGA
GAAGGCTTATTTTATTTTGGATGAGTTTCTTTTGGGAGGGGAAGTTCAGGAAACATCCAAGAAAAATGTCCTTAAAGCAA
TTGAGCAGGCTGATCTACTGCAGGAGGAAGCTGAAACCCCACGTAGTGTTCTTGAAGAAATTGGACTGACATAA

Library Parental gene expression (RPM)
bodymap2_liver 9 .89 RPM
bodymap2_lung 36 .87 RPM
bodymap2_breast 44 .09 RPM
bodymap2_adipose 56 .49 RPM
bodymap2_adrenal 51 .93 RPM
bodymap2_skeletal_muscle 64 .95 RPM
bodymap2_thyroid 60 .41 RPM
bodymap2_prostate 47 .86 RPM
bodymap2_colon 105 .96 RPM
bodymap2_testis 121 .00 RPM
bodymap2_brain 71 .49 RPM
bodymap2_heart 130 .50 RPM
bodymap2_white_blood_cells 350 .15 RPM
bodymap2_lymph_node 66 .97 RPM
bodymap2_ovary 36 .36 RPM
bodymap2_kidney 31 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004393 ortholog_one2one 1 retrogene
retro_cjac_2312,
Dasypus novemcinctus ENSDNOG00000013888 ortholog_one2one 1 retrogene
retro_dnov_1786,
Homo sapiens ENSG00000100478 within_species_paralog 1 retrogene
retro_hsap_3496,
Homo sapiens ENSG00000106367 within_species_paralog 1 retrogene
retro_hsap_3765,
Macaca mulatta ENSMMUG00000014055 ortholog_one2one 1 retrogene
retro_mmul_1716,
Monodelphis domestica ENSMODG00000017197 ortholog_one2one 7 retrogenes
retro_mdom_1189, retro_mdom_1329, retro_mdom_1441, retro_mdom_1470, retro_mdom_1616, retro_mdom_1987, retro_mdom_903,
Otolemur garnettii ENSOGAG00000011342 ortholog_one2one 3 retrogenes
retro_ogar_2038, retro_ogar_265, retro_ogar_3453,
Procavia capensis ENSPCAG00000000733 ortholog_one2one 1 retrogene
retro_pcap_386,
Sarcophilus harrisii ENSSHAG00000013119 ortholog_one2one 2 retrogenes
retro_shar_651, retro_shar_690,
Ictidomys tridecemlineatus ENSSTOG00000008517 possible_ortholog 1 retrogene
retro_itri_131,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1849 100.00 75.16
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Download FASTA sequences of all ENSG00000182287 retrocopies