Parental gene:

MMU.1759, ENSMMUG00000014055

Aliases:None
Description:AP-1 complex subunit sigma-2 [Source:RefSeq peptide;Acc:NP_001181839]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:13586508..13612784(-)


>ENSMMUG00000014055
ATGCAGTTTATGTTGCTTTTTAGTCGTCAGGGAAAGCTTCGACTGCAAAAATGGTATGTCCCACTATCAGACAAAGAGAA
GAAAAAGATCACAAGAGAACTTGTTCAGACCGTTTTAGCACGGAAACCTAAAATGTGCAGCTTCCTTGAGTGGCGAGATC
TGAAGATTGTTTACAAAAGATATGCTAGTCTATATTTTTGCTGTGCTATTGAGGATCAGGACAATGAACTAATTACCCTG
GAAATAATTCATCGTTATGTGGAATTACTTGACAAGTATTTCGGCAGTGTCTGTGAACTAGATATCATCTTTAATTTTGA
GAAGGCTTATTTTATTTTGGATGAGTTTCTTTTGGGAGGGGAAGTTCAGGAAACATCCAAGAAAAATGTCCTTAAAGCAA
TTGAGCAGGCCGATCTACTGCAGGAGGAAGCTGAAACCCCACGTAGTGTTCTTGAAGAAATTGGACTGACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .19 RPM
SRP007412_brain 51 .66 RPM
SRP007412_cerebellum 61 .41 RPM
SRP007412_heart 47 .82 RPM
SRP007412_kidney 7 .51 RPM
SRP007412_liver 3 .33 RPM
SRP007412_testis 10 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004393 ortholog_one2one 1 retrogene
retro_cjac_2312,
Dasypus novemcinctus ENSDNOG00000013888 ortholog_one2one 1 retrogene
retro_dnov_1786,
Homo sapiens ENSG00000182287 ortholog_one2one 1 retrogene
retro_hsap_1849,
Macaca mulatta ENSMMUG00000003123 within_species_paralog 1 retrogene
retro_mmul_17,
Monodelphis domestica ENSMODG00000017197 ortholog_one2one 7 retrogenes
retro_mdom_1189, retro_mdom_1329, retro_mdom_1441, retro_mdom_1470, retro_mdom_1616, retro_mdom_1987, retro_mdom_903,
Otolemur garnettii ENSOGAG00000011342 ortholog_one2one 3 retrogenes
retro_ogar_2038, retro_ogar_265, retro_ogar_3453,
Procavia capensis ENSPCAG00000000733 ortholog_one2one 1 retrogene
retro_pcap_386,
Sarcophilus harrisii ENSSHAG00000013119 ortholog_one2one 2 retrogenes
retro_shar_651, retro_shar_690,
Ictidomys tridecemlineatus ENSSTOG00000008517 possible_ortholog 1 retrogene
retro_itri_131,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1716 75.93 67.52
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Download FASTA sequences of all ENSMMUG00000014055 retrocopies