Parental gene:

HNRNPAB, ENSG00000197451

Aliases:HNRNPAB, ABBP1, HNRPAB
Description:heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:5034]
Organism:Human (Homo sapiens)
Coordinates:5:177631507..177638164(+)


>ENSG00000197451
ATGTCGGAAGCGGGCGAGGAGCAGCCCATGGAGACGACGGGCGCCACCGAGAACGGACATGAGGCCGTCCCCGAAGGCGA
GTCGCCGGCCGGGGCTGGCACGGGCGCCGCGGCGGGGGCTGGAGGCGCGACCGCGGCGCCCCCGAGCGGGAATCAGAACG
GCGCCGAGGGCGACCAGATCAACGCCAGCAAGAACGAGGAGGACGCGGGAAAAATGTTCGTTGGTGGCCTGAGCTGGGAT
ACTAGCAAAAAAGATTTAAAAGACTATTTTACTAAATTTGGAGAGGTCGTTGACTGTACAATAAAAATGGATCCCAACAC
TGGACGGTCAAGAGGGTTTGGGTTTATCCTGTTCAAAGATGCAGCCAGTGTGGAGAAGGTCCTAGACCAGAAGGAGCACA
GGCTGGATGGCCGTGTCATTGACCCTAAAAAGGCCATGGCTATGAAGAAGGACCCGGTGAAGAAAATCTTCGTTGGGGGT
CTGAATCCTGAAGCCACTGAGGAAAAGATCAGGGAGTACTTTGGCGAGTTTGGGGAGATTGAGGCCATTGAATTGCCAAT
GGATCCAAAGTTGAACAAAAGACGAGGTTTTGTGTTTATCACCTTTAAAGAAGAAGAACCCGTGAAGAAGGTTCTGGAGA
AAAAGTTCCATACTGTCAGTGGAAGCAAGTGTGAGATCAAGGTGGCCCAGCCCAAAGAAGTCTATCAGCAGCAGCAGTAT
GGCTCTGGGGGCCGTGGAAACCGCAACCGAGGGAACCGAGGCAGCGGAGGTGGTGGTGGAGGTGGAGGTCAGAGTCAGAG
TTGGAATCAGGGCTACGGCAACTACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGGCCTGGCTATGGCGGCTACG
ACTACTCGCCCTATGGCTATTACGGCTACGGCCCCGGCTACGACTACAGTCAGGGTAGTACAAACTACGGCAAGAGCCAG
CGACGTGGTGGCCATCAGAATAACTACAAGCCATACTGA

Library Parental gene expression (RPM)
bodymap2_liver 65 .76 RPM
bodymap2_lung 91 .91 RPM
bodymap2_breast 69 .53 RPM
bodymap2_adipose 96 .67 RPM
bodymap2_adrenal 131 .11 RPM
bodymap2_skeletal_muscle 77 .77 RPM
bodymap2_thyroid 79 .13 RPM
bodymap2_prostate 65 .57 RPM
bodymap2_colon 107 .68 RPM
bodymap2_testis 80 .16 RPM
bodymap2_brain 36 .03 RPM
bodymap2_heart 51 .71 RPM
bodymap2_white_blood_cells 55 .68 RPM
bodymap2_lymph_node 87 .27 RPM
bodymap2_ovary 115 .12 RPM
bodymap2_kidney 95 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000241 ortholog_one2one 2 retrogenes
retro_cfam_408, retro_cfam_412,
Homo sapiens ENSG00000135486 other_paralog 57 retrogenes
retro_hsap_1021, retro_hsap_1042, retro_hsap_1082, retro_hsap_1240, retro_hsap_1276, retro_hsap_1282, retro_hsap_1287, retro_hsap_1481, retro_hsap_158, retro_hsap_1584, retro_hsap_1613, retro_hsap_1638, retro_hsap_1711, retro_hsap_1899, retro_hsap_1933, retro_hsap_2002, retro_hsap_2029, retro_hsap_2091, retro_hsap_2096, retro_hsap_2197, retro_hsap_2347, retro_hsap_2379, retro_hsap_2636, retro_hsap_2640, retro_hsap_2668, retro_hsap_2718, retro_hsap_2857, retro_hsap_291, retro_hsap_2917, retro_hsap_2944, retro_hsap_3049, retro_hsap_3055, retro_hsap_332, retro_hsap_3343, retro_hsap_3393, retro_hsap_3432, retro_hsap_3439, retro_hsap_3449, retro_hsap_3549, retro_hsap_3745, retro_hsap_3756, retro_hsap_3757, retro_hsap_394, retro_hsap_3979, retro_hsap_4011, retro_hsap_4084, retro_hsap_414, retro_hsap_4218, retro_hsap_4282, retro_hsap_437, retro_hsap_4747, retro_hsap_482, retro_hsap_4883, retro_hsap_668, retro_hsap_84, retro_hsap_845, retro_hsap_924,
Homo sapiens ENSG00000138668 within_species_paralog 1 retrogene
retro_hsap_4689,
Homo sapiens ENSG00000170144 other_paralog 11 retrogenes
retro_hsap_1117, retro_hsap_1274, retro_hsap_1572, retro_hsap_209, retro_hsap_2194, retro_hsap_2664, retro_hsap_2951, retro_hsap_34, retro_hsap_4764, retro_hsap_665, retro_hsap_862,
Loxodonta africana ENSLAFG00000001189 ortholog_one2one 1 retrogene
retro_lafr_405,
Macropus eugenii ENSMEUG00000007909 ortholog_one2one 2 retrogenes
retro_meug_169, retro_meug_246,
Myotis lucifugus ENSMLUG00000003380 ortholog_one2one 2 retrogenes
retro_mluc_2024, retro_mluc_2138,
Nomascus leucogenys ENSNLEG00000015775 ortholog_one2one 1 retrogene
retro_nleu_1611,
Oryctolagus cuniculus ENSOCUG00000026424 ortholog_one2one 3 retrogenes
retro_ocun_1800, retro_ocun_1811, retro_ocun_950,
Otolemur garnettii ENSOGAG00000030251 ortholog_one2one 2 retrogenes
retro_ogar_3509, retro_ogar_385,
Pongo abelii ENSPPYG00000016107 ortholog_one2one 1 retrogene
retro_pabe_821,
Pan troglodytes ENSPTRG00000017601 ortholog_one2one 1 retrogene
retro_ptro_666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_962 81.78 85.61
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Download FASTA sequences of all ENSG00000197451 retrocopies