Parental gene: | HNRNPAB, ENSLAFG00000001189 |
| Aliases: | None |
| Description: | None |
| Organism: | Elephant (Loxodonta africana) |
| Coordinates: | scaffold_1:102617404..102623136(+) |
>ENSLAFG00000001189
ATGTCGGAAGTGGGTGAGGAGCAACCCATGGAGACGACAGGCGCCACCGAAAACGGACACGAGGCCGCCCCCGAAGGCGA
GTCGCCGGCCGGTACCGGCAGCGGGGCCGCGACAGGGGCCGAAATCGGGACCGCGGCCTCCCCCGGGACTCAGTACAGCG
CCGAGGGAGACCAGATAAACGCTAGCAAGAACGAAGAGGACGCGGGAAAAATGTTTGTTGGTGGCCTGAGCTGGGATACC
AGCAAAAAGGACTTAAAAGACTATTTTACCAAATTTGGAGAGGTCGTTGACTGTACGATAAAAATGGATCCCAACACTGG
ACGGTCAAGAGGGTTTGGGTTTATCCTCTTCAAGGATGCAACTAGTGTGGAGAAGGTGTTAGACCAGAAGGAGCATAGGC
TGGATGGCCGTGTCATTGACCCCAAAAAGGCCATGGCCATGAAGAAGGACCCAGTGAAGAAAATTTTTGTTGGGGGTCTG
AATCCCGAAGCCACTGAAGAAAAAATCAGGGAGTACTTCGGAGAGTTTGGAGAGATTGAGGCCATCGAACTTCCCATGGA
TCCAAAATCAAACAAAAGACGAGGCTTTGTTTTTATCACCTATAAAGAAGAGGAACCTGTGAAGAAGGTTCTGGAGAAAA
AGTTCCACACTGTCAGTGGAAGTAAGTGTGAAATCAAGGTGGCCCAGCCCAAGGAAGTCTACCAGCAGCAGCAGTATGGC
TCGGGGGGCCGCGGGAACCGCAACCGAGGGAACCGAGGCAGTGGCGGCGGTGGTCAGAGTCAGAGTTGGAATCAGGGCTA
CGGCAACTACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGGCCCGGCTATGGCGGCTACGACTACTCGCCCTATG
GCTATTACGGCTACGGCCCCGGCTACGACTACAGTCAGGGTAGTACAAATTACGGGAAGAGCCAGAGACGTGGTGGCCAC
CAGAATAACTACAAGCCGTACTGA
ATGTCGGAAGTGGGTGAGGAGCAACCCATGGAGACGACAGGCGCCACCGAAAACGGACACGAGGCCGCCCCCGAAGGCGA
GTCGCCGGCCGGTACCGGCAGCGGGGCCGCGACAGGGGCCGAAATCGGGACCGCGGCCTCCCCCGGGACTCAGTACAGCG
CCGAGGGAGACCAGATAAACGCTAGCAAGAACGAAGAGGACGCGGGAAAAATGTTTGTTGGTGGCCTGAGCTGGGATACC
AGCAAAAAGGACTTAAAAGACTATTTTACCAAATTTGGAGAGGTCGTTGACTGTACGATAAAAATGGATCCCAACACTGG
ACGGTCAAGAGGGTTTGGGTTTATCCTCTTCAAGGATGCAACTAGTGTGGAGAAGGTGTTAGACCAGAAGGAGCATAGGC
TGGATGGCCGTGTCATTGACCCCAAAAAGGCCATGGCCATGAAGAAGGACCCAGTGAAGAAAATTTTTGTTGGGGGTCTG
AATCCCGAAGCCACTGAAGAAAAAATCAGGGAGTACTTCGGAGAGTTTGGAGAGATTGAGGCCATCGAACTTCCCATGGA
TCCAAAATCAAACAAAAGACGAGGCTTTGTTTTTATCACCTATAAAGAAGAGGAACCTGTGAAGAAGGTTCTGGAGAAAA
AGTTCCACACTGTCAGTGGAAGTAAGTGTGAAATCAAGGTGGCCCAGCCCAAGGAAGTCTACCAGCAGCAGCAGTATGGC
TCGGGGGGCCGCGGGAACCGCAACCGAGGGAACCGAGGCAGTGGCGGCGGTGGTCAGAGTCAGAGTTGGAATCAGGGCTA
CGGCAACTACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGGCCCGGCTATGGCGGCTACGACTACTCGCCCTATG
GCTATTACGGCTACGGCCCCGGCTACGACTACAGTCAGGGTAGTACAAATTACGGGAAGAGCCAGAGACGTGGTGGCCAC
CAGAATAACTACAAGCCGTACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000000241 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000197451 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008612 | within_species_paralog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000016483 | within_species_paralog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000029587 | other_paralog | 5 retrogenes | |
| Macropus eugenii | ENSMEUG00000007909 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003380 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015775 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000026424 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030251 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016107 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017601 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lafr_405 | 66.87 | 50.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLAFG00000001189 retrocopies