Parental gene: | HNRNPAB, ENSOCUG00000026424 |
| Aliases: | None |
| Description: | heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:5034] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:58295551..58300578(+) |
>ENSOCUG00000026424
CAGAACGAGGAGGACGCGGGGAAAATGTTCGTTGGTGGTCTGAGCTGGGATACCAGCAAAAAAGATTTAAAGGACTATTT
TACTAAGTTTGGAGAGGTCGTTGACTGCACAATAAAAATGGATCCCAACACTGGACGGTCAAGAGGATTTGGGTTTATCC
TCTTCAAAGACGCAACCAGTGTGGAGAAGGAACAGGTCCTAGATCAGAAGGAGCACAGGCTGGATGGCCGTGTCATTGAC
CCTAAAAAGGCCATGGCTATGAAGAAGGACCCAGTGAAGAAGATCTTTGTGGGGGGTCTGAATCCTGAAGCTACTGAGGA
AAAGATCAGGGAGTACTTTGGCGAGTTTGGGGAGATTGAGGCCATTGAGCTTCCAATGGATCCAAAGTCGAACAAAAGAC
GGGGTTTTGTTTTTATCACCTTTAAAGAAGAAGACCCCGTGAAGAAGGTTCTGGAGAAAAAGTTCCATACCATCAGTGGA
AGCAAGTGTGAAATCAAGGTGGCCCAGCCCAAGGAGGTCTATCAGCAGCAGCAGTACGGCTCTGGGGGCCGCGGGAACCG
CAGCCGGGGGAGCCGAGGCAGTGGTGGCGGCGGTGGAGGTGGAGGTCAGAGTCAGAGTTGGAATCAGGGCTACGGCAACT
ACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGGCCCGGCTTTGGCGGCTACGACTACTCGCCCTATGGCTATTAC
GGCTACGGCCCCGGCTACGACTACAGTCAGGGTAGTGCAAATTACGGGAAGAGCCAGCGACGTGGTGGCCACCAGAATAA
CTACAAGCCGTACTGA
CAGAACGAGGAGGACGCGGGGAAAATGTTCGTTGGTGGTCTGAGCTGGGATACCAGCAAAAAAGATTTAAAGGACTATTT
TACTAAGTTTGGAGAGGTCGTTGACTGCACAATAAAAATGGATCCCAACACTGGACGGTCAAGAGGATTTGGGTTTATCC
TCTTCAAAGACGCAACCAGTGTGGAGAAGGAACAGGTCCTAGATCAGAAGGAGCACAGGCTGGATGGCCGTGTCATTGAC
CCTAAAAAGGCCATGGCTATGAAGAAGGACCCAGTGAAGAAGATCTTTGTGGGGGGTCTGAATCCTGAAGCTACTGAGGA
AAAGATCAGGGAGTACTTTGGCGAGTTTGGGGAGATTGAGGCCATTGAGCTTCCAATGGATCCAAAGTCGAACAAAAGAC
GGGGTTTTGTTTTTATCACCTTTAAAGAAGAAGACCCCGTGAAGAAGGTTCTGGAGAAAAAGTTCCATACCATCAGTGGA
AGCAAGTGTGAAATCAAGGTGGCCCAGCCCAAGGAGGTCTATCAGCAGCAGCAGTACGGCTCTGGGGGCCGCGGGAACCG
CAGCCGGGGGAGCCGAGGCAGTGGTGGCGGCGGTGGAGGTGGAGGTCAGAGTCAGAGTTGGAATCAGGGCTACGGCAACT
ACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGGCCCGGCTTTGGCGGCTACGACTACTCGCCCTATGGCTATTAC
GGCTACGGCCCCGGCTACGACTACAGTCAGGGTAGTGCAAATTACGGGAAGAGCCAGCGACGTGGTGGCCACCAGAATAA
CTACAAGCCGTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 79 .00 RPM |
| SRP017611_kidney | 164 .81 RPM |
| SRP017611_brain | 151 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000000241 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000197451 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000001189 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000007909 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003380 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015775 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002743 | other_paralog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000013350 | other_paralog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013805 | within_species_paralog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000026859 | within_species_paralog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030251 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016107 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017601 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_950 | 57.97 | 74.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1800 | 88.78 | 74.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1811 | 84.88 | 74.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000026424 retrocopies