Parental gene: | OSTC, ENSG00000198856 |
| Aliases: | None |
| Description: | oligosaccharyltransferase complex subunit (non-catalytic) [Source:HGNC Symbol;Acc:24448] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 4:109571739..109588976(+) |
>ENSG00000198856
ATGGAGACTTTGTACCGTGTCCCGTTCTTAGTGCTCGAATGTCCCAACCTGAAGCTGAAGAAGCCGCCCTGGTTGCACAT
GCCGTCGGCCATGACTGTGTATGCTCTGGTGGTGGTGTCTTACTTCCTCATCACCGGAGGAATAATTTATGATGTTATTG
TTGAACCTCCAAGTGTCGGTTCTATGACTGATGAACATGGGCATCAGAGGCCAGTAGCTTTCTTGGCCTACAGAGTAAAT
GGACAATATATTATGGAAGGACTTGCATCCAGCTTCCTATTTACAATGGGAGGTTTAGGTTTCATAATCCTGGACCGATC
GAATGCACCAAATATCCCAAAACTCAATAGATTCCTTCTTCTGTTCATTGGATTCGTCTGTGTCCTATTGAGTTTTTTCA
TGGCTAGAGTATTCATGAGAATGAAACTGCCACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCG
GCTCACTACAAACTCTGCCTCCCAGGGGCTATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 38 .62 RPM |
| bodymap2_adrenal | 62 .94 RPM |
| bodymap2_brain | 11 .16 RPM |
| bodymap2_breast | 51 .65 RPM |
| bodymap2_colon | 71 .12 RPM |
| bodymap2_heart | 18 .33 RPM |
| bodymap2_kidney | 90 .52 RPM |
| bodymap2_liver | 106 .95 RPM |
| bodymap2_lung | 55 .70 RPM |
| bodymap2_lymph_node | 74 .28 RPM |
| bodymap2_ovary | 67 .12 RPM |
| bodymap2_prostate | 57 .54 RPM |
| bodymap2_skeletal_muscle | 7 .31 RPM |
| bodymap2_testis | 62 .23 RPM |
| bodymap2_thyroid | 39 .79 RPM |
| bodymap2_white_blood_cells | 63 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011611 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016002 | possible_ortholog | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011172 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026873 | possible_ortholog | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000026381 | ortholog_one2one | 7 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000478 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000020599 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000011056 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000024222 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003446 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_376 | 89.33 | 100.00 | Please wait, loading  |
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| 2. | retro_hsap_1746 | 79.61 | 100.00 | Please wait, loading |
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| 3. | retro_hsap_2013 | 89.40 | 100.00 | Please wait, loading |
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| 4. | retro_hsap_2972 | 88.67 | 100.00 | Please wait, loading |
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| 5. | retro_hsap_3598 | 86.33 | 93.29 | Please wait, loading |
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| 6. | retro_hsap_3686 | 91.61 | 95.97 | Please wait, loading |
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| 7. | retro_hsap_4246 | 87.84 | 99.33 | Please wait, loading |
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Download FASTA sequences of all ENSG00000198856 retrocopies