Parental gene:

OSTC, ENSGGOG00000026873

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:4:118046902..118063501(+)


>ENSGGOG00000026873
ATGGAGACTTTGTACCGCGTCCCGTTCTTAGTGCTCGAATGTCCCAACCTGAAGCTGAAGAAGCCTCCCTGGTTGCACAT
GCCGTCGGCCATGACTGTGTATGCTCTGGTGGTGGTGTCTTACTTCCTCATCACCGGAGGAATAATTTATGATGTTATTG
TTGAACCTCCAAGTGTCGGTTCTATGACTGATGAACATGGACATCAGAGGCCAGTAGCTTTCTTGGCCTACAGAGTAAAT
GGACAATATATTATGGAAGGACTTGCATCCAGCTTCCTATTTACAATGGGAGGTTTAGGTTTCATAATCCTGGACCGATC
GAATGCACCAAATATCCCAAAACTCAATAGATTTCTTCTTCTGTTCATTGGATTCGTCTGTGTCCTATTGAGTTTTTTCA
TGGCTAGAGTATTCATGAGAATGAAACTGCCGGGCTATCTGATGGGTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .22 RPM
SRP007412_cerebellum 5 .99 RPM
SRP007412_heart 2 .47 RPM
SRP007412_kidney 18 .36 RPM
SRP007412_liver 38 .38 RPM
SRP007412_testis 14 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001753 possible_ortholog 2 retrogenes
retro_amel_1110, retro_amel_165,
Bos taurus ENSBTAG00000011611 possible_ortholog 1 retrogene
retro_btau_753,
Canis familiaris ENSCAFG00000011286 possible_ortholog 12 retrogenes
retro_cfam_1129, retro_cfam_1206, retro_cfam_1459, retro_cfam_1462, retro_cfam_1575, retro_cfam_1851, retro_cfam_1910, retro_cfam_1948, retro_cfam_2003, retro_cfam_263, retro_cfam_296, retro_cfam_814,
Callithrix jacchus ENSCJAG00000016002 ortholog_many2many 3 retrogenes
retro_cjac_121, retro_cjac_2981, retro_cjac_324,
Cavia porcellus ENSCPOG00000024467 possible_ortholog 1 retrogene
retro_cpor_659,
Dasypus novemcinctus ENSDNOG00000011172 possible_ortholog 2 retrogenes
retro_dnov_12, retro_dnov_1973,
Echinops telfairi ENSETEG00000003717 possible_ortholog 4 retrogenes
retro_etel_1564, retro_etel_492, retro_etel_878, retro_etel_970,
Homo sapiens ENSG00000198856 possible_ortholog 7 retrogenes
retro_hsap_1746, retro_hsap_2013, retro_hsap_2972, retro_hsap_3598, retro_hsap_3686, retro_hsap_376, retro_hsap_4246,
Loxodonta africana ENSLAFG00000026381 possible_ortholog 7 retrogenes
retro_lafr_1046, retro_lafr_17, retro_lafr_222, retro_lafr_231, retro_lafr_444, retro_lafr_549, retro_lafr_618,
Myotis lucifugus ENSMLUG00000000478 possible_ortholog 2 retrogenes
retro_mluc_1366, retro_mluc_1511,
Monodelphis domestica ENSMODG00000020599 possible_ortholog 1 retrogene
retro_mdom_428,
Mustela putorius furo ENSMPUG00000008869 possible_ortholog 1 retrogene
retro_mputfur_1451,
Mus musculus ENSMUSG00000041084 possible_ortholog 1 retrogene
retro_mmus_648,
Nomascus leucogenys ENSNLEG00000012929 ortholog_one2one 11 retrogenes
retro_nleu_1372, retro_nleu_1436, retro_nleu_2026, retro_nleu_2265, retro_nleu_2274, retro_nleu_2665, retro_nleu_2796, retro_nleu_2826, retro_nleu_297, retro_nleu_474, retro_nleu_923,
Oryctolagus cuniculus ENSOCUG00000011056 possible_ortholog 2 retrogenes
retro_ocun_1318, retro_ocun_7,
Otolemur garnettii ENSOGAG00000033684 ortholog_one2many 1 retrogene
retro_ogar_578,
Pan troglodytes ENSPTRG00000024222 possible_ortholog 1 retrogene
retro_ptro_34,
Pteropus vampyrus ENSPVAG00000005915 possible_ortholog 1 retrogene
retro_pvam_924,
Rattus norvegicus ENSRNOG00000023322 possible_ortholog 1 retrogene
retro_rnor_2297,
Sus scrofa ENSSSCG00000009145 possible_ortholog 1 retrogene
retro_sscr_503,
Ictidomys tridecemlineatus ENSSTOG00000021644 possible_ortholog 6 retrogenes
retro_itri_1211, retro_itri_1386, retro_itri_15, retro_itri_1571, retro_itri_789, retro_itri_863,
Tarsius syrichta ENSTSYG00000000724 possible_ortholog 2 retrogenes
retro_tsyr_1193, retro_tsyr_921,
Tursiops truncatus ENSTTRG00000003446 possible_ortholog 1 retrogene
retro_ttru_582,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_215 91.95 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ggor_370 88.67 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_ggor_385 88.16 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_ggor_1457 90.73 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_ggor_2060 89.33 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_ggor_2427 86.33 93.29
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000026873 retrocopies