Parental gene: | IDI1, ENSGGOG00000000934 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 10:1054141..1058269(-) |
>ENSGGOG00000000934
ATGCCTGAAATAAACACTAACCACCTCGACAAGCAACAGGTTCAACTCCTGGCAGAGATGTGTATCCTTATTGATGAAAA
TGACAATAAAATTGGAGCTGAGACCAAGAAGAATTGTCACCTGAACGAGAACATTGAGAAAGGATTATTGCATCGAGCTT
TTAGTGTCTTCTTATTCAACACCGAAAATAAGCTTCTGCTACAGCAAAGATCAGATGCTAAGATTACCTTTCCAGGTTGT
TTTACTAACACGTGTTGTAGTCATCCATTAAGTAATCCAGCCGAGCTTGAGGAAAGTGACGCCCTTGGAGTGAGGCGAGC
AGCACAGAGACGGCTGAAAGCTGAGCTAGGAATTCCCTTGGAAGAGGTTCCTCCAGAAGAAATTAATTATTTAACACGAA
TTCACTACAAAGCTCAGTCTGATGGTATCTGGGGTGAACATGAAATTGATTACATTTTGTTGGTGAGGAAGAATGTAACT
TTGAATCCAGATCCCAATGAGATTAAAAGCTATTGTTATGTGTCAAAGGAAGAACTAAAAGAACTTCTGAAAAAAGCAGC
CAGTGGTGAAATTAAGATAACGCCATGGTTTAAAATTATTGCAGCGACTTTTCTCTTTAAATGGTGGGATAACTTAAATC
ATTTGAATCAGTTTGTTGACCATGAGAAAATATACAGAATGTGA
ATGCCTGAAATAAACACTAACCACCTCGACAAGCAACAGGTTCAACTCCTGGCAGAGATGTGTATCCTTATTGATGAAAA
TGACAATAAAATTGGAGCTGAGACCAAGAAGAATTGTCACCTGAACGAGAACATTGAGAAAGGATTATTGCATCGAGCTT
TTAGTGTCTTCTTATTCAACACCGAAAATAAGCTTCTGCTACAGCAAAGATCAGATGCTAAGATTACCTTTCCAGGTTGT
TTTACTAACACGTGTTGTAGTCATCCATTAAGTAATCCAGCCGAGCTTGAGGAAAGTGACGCCCTTGGAGTGAGGCGAGC
AGCACAGAGACGGCTGAAAGCTGAGCTAGGAATTCCCTTGGAAGAGGTTCCTCCAGAAGAAATTAATTATTTAACACGAA
TTCACTACAAAGCTCAGTCTGATGGTATCTGGGGTGAACATGAAATTGATTACATTTTGTTGGTGAGGAAGAATGTAACT
TTGAATCCAGATCCCAATGAGATTAAAAGCTATTGTTATGTGTCAAAGGAAGAACTAAAAGAACTTCTGAAAAAAGCAGC
CAGTGGTGAAATTAAGATAACGCCATGGTTTAAAATTATTGCAGCGACTTTTCTCTTTAAATGGTGGGATAACTTAAATC
ATTTGAATCAGTTTGTTGACCATGAGAAAATATACAGAATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 45 .94 RPM |
| SRP007412_cerebellum | 30 .73 RPM |
| SRP007412_heart | 3 .63 RPM |
| SRP007412_kidney | 20 .77 RPM |
| SRP007412_liver | 31 .15 RPM |
| SRP007412_testis | 79 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008483 | ortholog_one2one | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000012555 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000067064 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000017115 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000005998 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000058258 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013594 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007493 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000008692 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000002039 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000002239 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000023260 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011174 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1521 | 69.81 | 92.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1717 | 88.17 | 81.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2722 | 72.05 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000000934 retrocopies