Parental gene:

ENSOCUG00000007493

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018707:279294..281968(-)


>ENSOCUG00000007493
ATGCCGGAAATACGTACTGACCATCTCGATGAGCAACAGGTTCAACTTCTGGCAGAGATGTGTATTCTTATTGATGAAAA
TGACAATAAAATTGGGGCTGATACCAAGAAGAACTGTCACCTGAATGAAAACATTGAGAAAGGGTTGTTGCACCGAGCTT
TTAGTGTCTTCTTATTCAATACTGAAAATAAGCTCCTGCTACAGCAGAGATCAGATGCTAAAATTACCTTTCCAGGTTGT
TTTACCAATACTTGTTGTAGTCATCCGTTAAGTAACCCACATGAACTTGAAGAAAATGATGCCATTGGAGTAAGAAGGGC
GGCACAGAGGCGTTTAAAAGCTGAACTAGGAATTCCTATGGAAGAGGTTCCTCCAGAAGAAATAAATTATCTAACACGAA
TTCACTACAAAGCTCAATCTGATGGTATTTGGGGTGAACATGAGATTGATTACATTTTATTTGTGAGGAAGAATGTAACT
TTGAACCCAGATCCCAATGAGATTAAAAGCTATTGTTATGTGACAAAAGAAGAACTGGAAGAACTTCTGAAAAAAGCAGC
CAGTGGTGAAATTAAGATAACTCCATGGTTTCAAATTATTGCAGAGACTTTTCTCTTTAAATGGTGGGATAACTTAAGTA
ATTTGAATCAGTTTGTTGACCATGAGAAAATACATAGAATGTGA

Library Parental gene expression (RPM)
SRP017611_liver 10 .02 RPM
SRP017611_kidney 3 .95 RPM
SRP017611_brain 15 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008483 ortholog_one2many 3 retrogenes
retro_cjac_2083, retro_cjac_2591, retro_cjac_2820,
Erinaceus europaeus ENSEEUG00000012555 ortholog_one2many 3 retrogenes
retro_eeur_188, retro_eeur_198, retro_eeur_61,
Homo sapiens ENSG00000067064 ortholog_one2many 3 retrogenes
retro_hsap_2161, retro_hsap_2444, retro_hsap_4053,
Gorilla gorilla ENSGGOG00000000934 ortholog_one2many 3 retrogenes
retro_ggor_1521, retro_ggor_1717, retro_ggor_2722,
Macaca mulatta ENSMMUG00000017115 ortholog_one2many 3 retrogenes
retro_mmul_2340, retro_mmul_632, retro_mmul_899,
Monodelphis domestica ENSMODG00000005998 ortholog_one2many 5 retrogenes
retro_mdom_1107, retro_mdom_1692, retro_mdom_1697, retro_mdom_1724, retro_mdom_547,
Mus musculus ENSMUSG00000058258 ortholog_one2many 4 retrogenes
retro_mmus_2032, retro_mmus_2660, retro_mmus_417, retro_mmus_552,
Nomascus leucogenys ENSNLEG00000013594 ortholog_one2many 3 retrogenes
retro_nleu_1810, retro_nleu_2777, retro_nleu_2804,
Ochotona princeps ENSOPRG00000008692 ortholog_one2many 2 retrogenes
retro_opri_694, retro_opri_755,
Pongo abelii ENSPPYG00000002039 ortholog_one2many 2 retrogenes
retro_pabe_1783, retro_pabe_3327,
Pan troglodytes ENSPTRG00000002239 ortholog_one2many 3 retrogenes
retro_ptro_1412, retro_ptro_1647, retro_ptro_2747,
Ictidomys tridecemlineatus ENSSTOG00000023260 ortholog_many2many 1 retrogene
retro_itri_118,
Tursiops truncatus ENSTTRG00000011174 ortholog_one2many 1 retrogene
retro_ttru_255,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_267 99.56 100.00
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Download FASTA sequences of all ENSOCUG00000007493 retrocopies