Parental gene:

LSM5, ENSGGOG00000010325

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:7:32979191..32983423(-)


>ENSGGOG00000010325
ATGGCGGCTAACGCTACTACCAACCCGTCGCAGCTGCTGCCGTTAGAGCTTGTGGACAAATGTATAGGATCAAGAATTCA
CATCGTGATGAAGAGTGATAAGGAAATTGTTGGTACTCTTCTAGGATTTGATGACTTTGTCAATATGGTACTGGAAGATG
TCACTGAGTTTGAAATCACACCAGAAGGAAGAAGGATTACTAAATTAGATCAGATTTTGCTAAATGGAAATAATATAACA
ATGCTGGTTCCTGGAGGAGAAGGACCTGAAGTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .83 RPM
SRP007412_cerebellum 3 .62 RPM
SRP007412_heart 0 .84 RPM
SRP007412_kidney 9 .36 RPM
SRP007412_liver 5 .35 RPM
SRP007412_testis 5 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009185 possible_ortholog 3 retrogenes
retro_cjac_1883, retro_cjac_2760, retro_cjac_3068,
Echinops telfairi ENSETEG00000018068 possible_ortholog 8 retrogenes
retro_etel_1305, retro_etel_1502, retro_etel_1907, retro_etel_198, retro_etel_2054, retro_etel_2193, retro_etel_454, retro_etel_964,
Homo sapiens ENSG00000106355 ortholog_one2one 2 retrogenes
retro_hsap_3703, retro_hsap_4216,
Microcebus murinus ENSMICG00000005353 ortholog_one2one 3 retrogenes
retro_mmur_1345, retro_mmur_69, retro_mmur_950,
Myotis lucifugus ENSMLUG00000017028 ortholog_one2one 1 retrogene
retro_mluc_2439,
Oryctolagus cuniculus ENSOCUG00000029043 ortholog_one2one 5 retrogenes
retro_ocun_1284, retro_ocun_1452, retro_ocun_1513, retro_ocun_1556, retro_ocun_903,
Ochotona princeps ENSOPRG00000002443 ortholog_one2one 3 retrogenes
retro_opri_26, retro_opri_562, retro_opri_701,
Pongo abelii ENSPPYG00000017661 possible_ortholog 1 retrogene
retro_pabe_3449,
Rattus norvegicus ENSRNOG00000042126 possible_ortholog 3 retrogenes
retro_rnor_1171, retro_rnor_567, retro_rnor_694,
Sus scrofa ENSSSCG00000026064 ortholog_one2one 1 retrogene
retro_sscr_385,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2504 72.31 70.33
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2. retro_ggor_2824 79.41 72.53
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Download FASTA sequences of all ENSGGOG00000010325 retrocopies