Parental gene:

NSFL1C, ENSGGOG00000013539

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:20:1458563..1484089(-)


>ENSGGOG00000013539
ATGGCGGCGGAGCGACAGGAGGCGCTGAGGGAGTTCGTGGCGGTGACGGGCGCCGAGGAGGACCGGGCCCGCTTCTTTCT
CGAGTCGGCCGGCTGGGACTTGCAGATCGCGCTAGCGAGCTTTTATGAGGACGGAGGGGATGAAGACATTGTGACCATTT
CGCAGGCAACCCCCAGTTCAGTGTCCAGAGGCACAGCCCCCAGTGATAATAGAGTGACATCCTTCAGAGACCTCATTCAT
GACCAAGATGAAGATGAGGAGGAGGAGGAAGGCCAGAGACACAGGTTTTATGCTGGGGGCTCAGAGAGAAGTGGACAGCA
GATTGTTGGCCCTCCCAGGAAGAAAAGTCCCAACGAGCTGGTGGATGATCTCTTTAAAGGTGCCAAAGAGCATGGAGCTG
TAGCTGTGGAGCGAGTGACCAAGAGCCCTGGAGAGACCAGTAAACCGAGACCATTTGCAGGAGGTGGCTACCGCCTTGGG
GCAGCACCAGAGGAAGAGTCTGCCTATGTGGCAGGAGAAAAGAGGCAGCATTCCAGCCAAGATGTTCATGTAGTATTGAA
ACTCTGGAAGAGTGGATTCAGCCTGGATAATGGAGAACTCAGAAGCTACCAAGACCCATCCAATGCCCAGTTTCTGGAGT
CTATCCGCAGAGGAGAGGTGCCAGCAGAGCTTCGGAGGCTAGCTCACGGTGGACAGGTGAACTTGGATATGGAGGACCAT
CGGGACGAGGACTTTGTGAAGCCCAAAGGAGCCTTCAAAGCCTTCACTGGCGAGGGTCAGAAACTGGGCAGCACTGCCCC
CCAGGTGCTGAGTACCAGCTCTCCAGCCCAACAGGCAGAAAATGAAGCCAAAGCCAGCTCTTCCATCTTAATCGACGAAT
CAGAGCCTACCACAAACATCCAAATTCGGCTTGCAGACGGCGGGAGGCTGGTGCAGAAATTTAACCACAGCCACAGGATC
AGCGACATCCGACTCTTCATCGTGGATGCCCGGCCAGCCATGGCTGCCACCAGCTTTATCCTCATGACTACTTTCCCGAA
CAAAGAGCTGGCTGATGAGAGCCAGACCCTGAAGGAAGCCAACCTGCTCAATGCTGTCATCGTGCAGCGGTTAACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 89 .15 RPM
SRP007412_cerebellum 51 .41 RPM
SRP007412_heart 25 .52 RPM
SRP007412_kidney 44 .12 RPM
SRP007412_liver 32 .58 RPM
SRP007412_testis 48 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000088833 ortholog_one2one 1 retrogene
retro_hsap_4050,
Gorilla gorilla ENSGGOG00000002445 within_species_paralog 1 retrogene
retro_ggor_1463,
Macropus eugenii ENSMEUG00000003940 ortholog_one2one 2 retrogenes
retro_meug_1890, retro_meug_605,
Macaca mulatta ENSMMUG00000015994 ortholog_one2one 1 retrogene
retro_mmul_2337,
Mus musculus ENSMUSG00000027455 ortholog_one2one 1 retrogene
retro_mmus_2565,
Nomascus leucogenys ENSNLEG00000009341 ortholog_one2one 1 retrogene
retro_nleu_2800,
Otolemur garnettii ENSOGAG00000002630 ortholog_one2one 2 retrogenes
retro_ogar_1144, retro_ogar_1609,
Pongo abelii ENSPPYG00000010851 ortholog_one2one 1 retrogene
retro_pabe_3324,
Pan troglodytes ENSPTRG00000013164 ortholog_one2one 1 retrogene
retro_ptro_2745,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2718 85.37 98.92
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Download FASTA sequences of all ENSGGOG00000013539 retrocopies